Jatropha Genome Database

JcCB0756571.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0756571.10 + phase: 0 /partial
         (406 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02404                                                            805   0.0  

>KJC_c02404 
          Length = 1811

 Score =  805 bits (406), Expect = 0.0
 Identities = 406/406 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgatgttgatgaaacactcggttccaatcctctgttgcaggacttcgaattccct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36  atggctgatgttgatgaaacactcggttccaatcctctgttgcaggacttcgaattccct 95

                                                                       
Query: 61  ccttttgatgttgtcgaggctaaacatgttcgacctgggattcgtgctctgctaaagaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ccttttgatgttgtcgaggctaaacatgttcgacctgggattcgtgctctgctaaagaaa 155

                                                                       
Query: 121 cttgagagtgatttggaggaattggagagaacattggaaccatcatggccaaaattggta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 cttgagagtgatttggaggaattggagagaacattggaaccatcatggccaaaattggta 215

                                                                       
Query: 181 gagccattcgaaaagattatagatcaattagctgttgtttggggtgcgatcaatcacctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gagccattcgaaaagattatagatcaattagctgttgtttggggtgcgatcaatcacctt 275

                                                                       
Query: 241 aagtctgttaaggatactcctgaactccgtgctgcaattgaagaagttcagccagaaaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aagtctgttaaggatactcctgaactccgtgctgcaattgaagaagttcagccagaaaag 335

                                                                       
Query: 301 gtcaagtttgagcttaggctaggacaaagtaaaccgatttacaatgcatttaaagctatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtcaagtttgagcttaggctaggacaaagtaaaccgatttacaatgcatttaaagctatc 395

                                                         
Query: 361 caagaatctcctcaatggcagtcactaagtgatgctcagaagcgta 406
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 caagaatctcctcaatggcagtcactaagtgatgctcagaagcgta 441