Jatropha Genome Database

JcCB0748211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0748211.10 - phase: 0 
         (594 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03062                                                            922   0.0  

>KJC_c03062 
          Length = 1362

 Score =  922 bits (465), Expect = 0.0
 Identities = 465/465 (100%)
 Strand = Plus / Minus

                                                                        
Query: 20   cattatcaatcctcttcatcttcttggcgtacaaactctatcaccatctacgcttcaaac 79
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 cattatcaatcctcttcatcttcttggcgtacaaactctatcaccatctacgcttcaaac 1173

                                                                        
Query: 80   tccctcccggcccacgaccatggccaattgtcggcaacctctatgacataaagcctgttc 139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 tccctcccggcccacgaccatggccaattgtcggcaacctctatgacataaagcctgttc 1113

                                                                        
Query: 140  ggttccgttgcttcgcagaatgggctcagtcttatggtccgatcatttcagtttggttcg 199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 ggttccgttgcttcgcagaatgggctcagtcttatggtccgatcatttcagtttggttcg 1053

                                                                        
Query: 200  gttccacgttaaacgtgatcgtttcgaatacagaattggcgagagaagtgctaaaggaaa 259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 gttccacgttaaacgtgatcgtttcgaatacagaattggcgagagaagtgctaaaggaaa 993

                                                                        
Query: 260  atgatcaacagttagctgataggcatagaagtagatcggctgccaagttcagcagagatg 319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992  atgatcaacagttagctgataggcatagaagtagatcggctgccaagttcagcagagatg 933

                                                                        
Query: 320  ggaaagatcttatatgggccgattatggacctcactatgtgaaggttaggaaagtttgta 379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932  ggaaagatcttatatgggccgattatggacctcactatgtgaaggttaggaaagtttgta 873

                                                                        
Query: 380  ctcttgagcttttcactcctaagagactcgaggctttgagacctattagggaagacgagg 439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872  ctcttgagcttttcactcctaagagactcgaggctttgagacctattagggaagacgagg 813

                                                         
Query: 440  ttacggccatggttgaatctattttcactgactgcaccaatcctg 484
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812  ttacggccatggttgaatctattttcactgactgcaccaatcctg 768