Jatropha Genome Database

JcCB0745041.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0745041.10 + phase: 0 /partial
         (380 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01660                                                            722   0.0  

>KJC_c01660 
          Length = 937

 Score =  722 bits (364), Expect = 0.0
 Identities = 378/380 (99%), Gaps = 2/380 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgggtaagtgggcaatagcagtgcatggaggcgctggcgtggatccacatcttccacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 atgggtaagtgggcaatagcagtgcatggaggcgctggcgtggatccacatcttccacaa 875

                                                                       
Query: 61  cagcgtcaagaggaggccaaacaactccttgctcgctgcctcaatctcggcatctccgct 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 874 cagcgtcaagaggaggccaaaca-ctccttgctcgctgcctcaatctcggcatctccgct 816

                                                                       
Query: 121 cttcgctccaacctgcctgccatcgatgtcgttgaacttgttgtgcgagaactagaaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 cttcgctccaacctgcctgccatcgatgtcgttgaacttgttgtgcgagaactagaaagc 756

                                                                       
Query: 181 gatcctctttttaattctggccgtgggtctgctctaaccgagaagggaacggtggagatg 240
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gatcctctttttaat-ctggccgtgggtctgctctaaccgagaagggaacggtggagatg 697

                                                                       
Query: 241 gaagccagcattatggatgggccgagaagaagatgcggtgcggtatcaggtttaaccacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gaagccagcattatggatgggccgagaagaagatgcggtgcggtatcaggtttaaccacc 637

                                                                       
Query: 301 gttaaaaaccccatctcccttgcgcggcttgtaatggatagatctcctcattcctatctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gttaaaaaccccatctcccttgcgcggcttgtaatggatagatctcctcattcctatctt 577

                               
Query: 361 gccttctctggagcagaaga 380
           ||||||||||||||||||||
Sbjct: 576 gccttctctggagcagaaga 557