Jatropha Genome Database
- JcCB0736441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0736441.10 - phase: 0 /partial
(812 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01430 993 0.0
KJC_c01598 706 0.0
>KJC_c01430
Length = 1246
Score = 993 bits (501), Expect = 0.0
Identities = 549/557 (98%), Gaps = 6/557 (1%)
Strand = Plus / Minus
Query: 251 gccttccaactataaataaacgatttgctgctacattagggg-aacttg-ttggtggaag 308
||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 1246 gccttacaactataaataa-cgatttgctgctacattagggggaacttggttggtggaag 1188
Query: 309 ggttggccttgcatattcttcagttgctg-tactcaagcttgctggaacaattgccatcc 367
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1187 ggttggccttgcatattcttcagttgctggtactcaagcttgctggaacaattgccatcc 1128
Query: 368 gatattctttgctgcgccagcagtttggccctcccaagcagcctgaagtcagtattcttg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 gatattctttgctgcgccagcagtttggccctcccaagcagcctgaagtcagtattcttg 1068
Query: 428 attatcagtctcagcagcacaagctcatgccaatgctagcttcaacttatgcattccatt 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 attatcagtctcagcagcacaagctcatgccaatgctagcttcaacttatgcattccatt 1008
Query: 488 ttgccgctattcatttggtagaaaaatattcggagatgaaaaagactcatgatgaacaat 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ttgccgctattcatttggtagaaaaatattcggagatgaaaaagactcatgatgaacaat 948
Query: 548 tagttggagatgtccatgcactttcagctggccttaaggcatatgtgacatcatatacag 607
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 947 tagttggagatgtccatgcactttaagctggccttaaggcatatgtgacatcatatacag 888
Query: 608 caaagtcattgtctgtctgccgggaagcatgtggaggacatgggtatgctgctgtcaatc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 caaagtcattgtctgtctgccgggaagcatgtggaggacatgggtatgctgctgtcaatc 828
Query: 668 ggtttggtaccttgagaaatgaccatgacatttttcagacatttgaaggggataacacag 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ggtttggtaccttgagaaatgaccatgacatttttcagacatttgaaggggataacacag 768
Query: 728 tgctgctacaacaggtagcaggtgatctcttaaagcaatacaagggagaagttccaaggt 787
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 767 tgctgctacaacaggtagcaggtgatctcttaaagcaatacaa-ggagaagttccaaggt 709
Query: 788 -ggacattggcagtgac 803
||||||||||||||||
Sbjct: 708 gggacattggcagtgac 692
>KJC_c01598
Length = 1154
Score = 706 bits (356), Expect = 0.0
Identities = 384/388 (98%), Gaps = 4/388 (1%)
Strand = Plus / Minus
Query: 3 caggctgattttgcctactcatgattctaagggcgtctctgatatgggtgtccatgcctt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caggctgattttgcctactcatgattctaagggcgtctctgatatgggtgtccatgcctt 325
Query: 63 cattgttccgataagggatataaatactcaccagacacttccaggaattgaaatacatga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cattgttccgataagggatataaatactcaccagacacttccaggaattgaaatacatga 265
Query: 123 ttgtggccacaagataggcctaaatggggtagacaatggagcgttgaggttcagttcagt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgtggccacaagataggcctaaatggggtagacaatggagcgttgaggttcagttcagt 205
Query: 183 aagaattccccgggataatcttcttaatcgatttggagatgtgtctcgggatgggaagta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aagaattccccgggataatcttcttaatcgatttggagatgtgtctcgggatgggaagta 145
Query: 243 cactagcagccttccaactataaataaacgatttgctgctacattaggggaacttgttgg 302
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 144 cactagcagccttccaactataaataaacgatttgctgctacatta-gggaacttgttgg 86
Query: 303 tggaagggttggccttgcatattcttcagttgctgtactcaagcttgctggaacaattgc 362
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 85 tggaa-ggttggccttgcatattcttcagttgctgtactcaagcttgctggaac-attgc 28
Query: 363 catccgatattctttgctgcgccagcag 390
|||||||||||| |||||||||||||||
Sbjct: 27 catccgatattc-ttgctgcgccagcag 1