Jatropha Genome Database

JcCB0704851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0704851.10 + phase: 0 
         (237 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04343                                                            428   e-120

>KJC_c04343 
          Length = 617

 Score =  428 bits (216), Expect = e-120
 Identities = 223/224 (99%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaggcgagcaagaggccgatccacgcagtggctacatggatacggcggcaaccgccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atgaaggcgagcaagaggccgatccacgcagtggctacatggatacggcggcaaccgccg 237

                                                                       
Query: 61  aaaatcaagacttttttagcagtcgtttcggggattgtggctttggtttttcttcgtatg 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaaatcaagactttt-tagcagtcgtttcggggattgtggctttggtttttcttcgtatg 296

                                                                       
Query: 121 gtggttcacgatcacgataacctctttgttgcttctgaagctgttcatgccgttggaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gtggttcacgatcacgataacctctttgttgcttctgaagctgttcatgccgttggaatt 356

                                                       
Query: 181 tctgtcttaatctacaagctcatgaaggaaaagacttgcgctgg 224
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tctgtcttaatctacaagctcatgaaggaaaagacttgcgctgg 400