Jatropha Genome Database

JcCB0703531.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0703531.10 - phase: 0 /partial
         (786 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10922                                                            842   0.0  

>KJC_c10922 
          Length = 746

 Score =  842 bits (425), Expect = 0.0
 Identities = 425/425 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaacgtatcataaatcagtctggatcgagtagctacccactgccagttaatcctcctagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaacgtatcataaatcagtctggatcgagtagctacccactgccagttaatcctcctagt 366

                                                                       
Query: 61  aattgggcccagccaggacaacctgttatgcaacaacagccccattatgggtatgcacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aattgggcccagccaggacaacctgttatgcaacaacagccccattatgggtatgcacaa 306

                                                                       
Query: 121 ccagcaactcaacctatgccctcttcttactatggcaactatgcccagcaacaatcttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ccagcaactcaacctatgccctcttcttactatggcaactatgcccagcaacaatcttgg 246

                                                                       
Query: 181 gatcagtcaaacccatcaacagtgtctcaaatgcctcagcaaatgactggatatggttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gatcagtcaaacccatcaacagtgtctcaaatgcctcagcaaatgactggatatggttac 186

                                                                       
Query: 241 tatggacaaccaccccaaatgggatctgctcctagctataactacaatcagaagactcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tatggacaaccaccccaaatgggatctgctcctagctataactacaatcagaagactcat 126

                                                                       
Query: 301 gttacaagcaacacttacgatcacagctacagtcagcaggcaccaagttatgggtcagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gttacaagcaacacttacgatcacagctacagtcagcaggcaccaagttatgggtcagct 66

                                                                       
Query: 361 gctgtgtcatctcaaccagatggggcaattccttcccaatccactcaagcagcccctgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  gctgtgtcatctcaaccagatggggcaattccttcccaatccactcaagcagcccctgca 6

                
Query: 421 taccc 425
           |||||
Sbjct: 5   taccc 1