Jatropha Genome Database

JcCB0703101.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0703101.10 + phase: 0 
         (777 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10952                                                            585   e-167

>KJC_c10952 
          Length = 390

 Score =  585 bits (295), Expect = e-167
 Identities = 295/295 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   aaaaccccaattactctgttgtagaaatcaacggtccggatgctgcatttcagccagttg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaaaccccaattactctgttgtagaaatcaacggtccggatgctgcatttcagccagttg 236

                                                                       
Query: 65  aaaagagcagaggaaagaatgctaagcaggtgacatgggttttgctcctaaaagctcata 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aaaagagcagaggaaagaatgctaagcaggtgacatgggttttgctcctaaaagctcata 176

                                                                       
Query: 125 gagctgtcggttgtgttgcttggctagctactttcttctgggcattgctcggagcaatca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gagctgtcggttgtgttgcttggctagctactttcttctgggcattgctcggagcaatca 116

                                                                       
Query: 185 agaagaggttgatctttagacaaggagttacagtggctactgagaagttagggaaaggga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 agaagaggttgatctttagacaaggagttacagtggctactgagaagttagggaaaggga 56

                                                                  
Query: 245 aactggtacttagaattattagagtgtttcttgcgacttctttgttaatcttggc 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  aactggtacttagaattattagagtgtttcttgcgacttctttgttaatcttggc 1