Jatropha Genome Database

JcCB0700881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0700881.10 + phase: 2 /partial
         (418 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03682                                                            821   0.0  

>KJC_c03682 
          Length = 1168

 Score =  821 bits (414), Expect = 0.0
 Identities = 417/418 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccgatttggtgcttggcctgttgcgatgcttgcccaaagcaaaaacaaagctattttgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccgatttggtgcttggcctgttgcgatgcttgcccaaagcaaaaacaaagctattttgga 395

                                                                       
Query: 61  aggtcccgtatgcaatggaagtcatgtaattggatggcacaccaacgaaaaaagtaaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aggtcccgtatgcaatggaagtcatgtaattggatggcacaccaacgaaaaaagtaaaag 335

                                                                       
Query: 121 actccgaaggtttcatgttgatatgtcaggatttgctttcaacagcactatcttgtggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 actccgaaggtttcatgttgatatgtcaggatttgctttcaacagcactatcttgtggga 275

                                                                       
Query: 181 tcctaagagatggcggcgcccattttctagtgcaattcgacagttagacacagtgaaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tcctaagagatggcggcgcccattttctagtgcaattcgacagttagacacagtgaaaga 215

                                                                       
Query: 241 gggtttccaagagaccacattcattgagcaagtgatagaagatgaaagtcaaatagaaag 300
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 214 gggtttccaagagaccacattcattgagcaagcgatagaagatgaaagtcaaatagaaag 155

                                                                       
Query: 301 tgttcctcctggatgttcaaggatactgaattggcatctccatttagatgcccatcatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tgttcctcctggatgttcaaggatactgaattggcatctccatttagatgcccatcatct 95

                                                                     
Query: 361 tgtctatccgagaggctggctatttcagaagaaccttgatgttattctccccatcaaa 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  tgtctatccgagaggctggctatttcagaagaaccttgatgttattctccccatcaaa 37