Jatropha Genome Database
- JcCB0700081.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0700081.10 + phase: 0 /partial
(1178 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09985 993 0.0
KJC_c10771 280 7e-75
KJC_c03844 64 8e-10
>KJC_c09985
Length = 518
Score = 993 bits (501), Expect = 0.0
Identities = 515/517 (99%), Gaps = 2/517 (0%)
Strand = Plus / Minus
Query: 654 atatgaaaatg-caggagttgataat-ctgatcccaatggagttggcactaaaggttgcc 711
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 518 atatgaaaatgacaggagttgataatactgatcccaatggagttggcactaaaggttgcc 459
Query: 712 agtaaaattagagccaatgagagatttgcagtgtatattgtggtcccaatgtggcctgag 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agtaaaattagagccaatgagagatttgcagtgtatattgtggtcccaatgtggcctgag 399
Query: 772 ggtgtcccaacatctggccccatgcaagaaattctatattggcagagccagacaatgcaa 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggtgtcccaacatctggccccatgcaagaaattctatattggcagagccagacaatgcaa 339
Query: 832 atgatgtacaatatcgtagcacaggaaattaaatcaatgcaacttgttgattcacatccc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 atgatgtacaatatcgtagcacaggaaattaaatcaatgcaacttgttgattcacatccc 279
Query: 892 aaagattacctcaatttctattgccttggaaaacgagaagaaaatacccagcagactgtg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaagattacctcaatttctattgccttggaaaacgagaagaaaatacccagcagactgtg 219
Query: 952 ataactgatgatgaaatggtatccgattctcaaaaatttcagcggttcacgatttatgtc 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ataactgatgatgaaatggtatccgattctcaaaaatttcagcggttcacgatttatgtc 159
Query: 1012 catgcaaagggaataattgtggatgatgagtatgccattattggatctgccaatatcaac 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 catgcaaagggaataattgtggatgatgagtatgccattattggatctgccaatatcaac 99
Query: 1072 cagagatccatggctggtacaaaagacactgagatagcaatgggtgcatatcaaccccat 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 cagagatccatggctggtacaaaagacactgagatagcaatgggtgcatatcaaccccat 39
Query: 1132 caaacttgggctgcaaagaagaaacatccacgtgggc 1168
|||||||||||||||||||||||||||||||||||||
Sbjct: 38 caaacttgggctgcaaagaagaaacatccacgtgggc 2
>KJC_c10771
Length = 570
Score = 280 bits (141), Expect = 7e-75
Identities = 189/205 (92%)
Strand = Plus / Minus
Query: 968 tggtatccgattctcaaaaatttcagcggttcacgatttatgtccatgcaaagggaataa 1027
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 540 tggtatccgattcccaaaaatttcagcggttcatgatttatgtccatgcaaagggaatga 481
Query: 1028 ttgtggatgatgagtatgccattattggatctgccaatatcaaccagagatccatggctg 1087
|||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 480 ttgtggatgacgagtatgccattatcggatctgccaatattaaccagagatccatggctg 421
Query: 1088 gtacaaaagacactgagatagcaatgggtgcatatcaaccccatcaaacttgggctgcaa 1147
|| |||||||||| |||||||| ||||||||||||||||||||| | || |||||||| |
Sbjct: 420 gttcaaaagacacggagatagctatgggtgcatatcaaccccattacacatgggctgcga 361
Query: 1148 agaagaaacatccacgtgggcaggt 1172
|||| || ||||||| |||||||||
Sbjct: 360 agaaaaagcatccacatgggcaggt 336
>KJC_c03844
Length = 1123
Score = 63.9 bits (32), Expect = 8e-10
Identities = 39/40 (97%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 12 gttgggactgtcttcacacaccatcaaaaaatgtgttctt 51
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 39 gttgggactgtcttcacacaccatca-aaaatgtgttctt 1