Jatropha Genome Database

JcCB0697191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0697191.10 - phase: 1 /partial
         (398 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03786                                                            789   0.0  

>KJC_c03786 
          Length = 695

 Score =  789 bits (398), Expect = 0.0
 Identities = 398/398 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaaagcctgtgagaatgtgacacaaccactgaagtttttatatccattggaaattagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aaaaagcctgtgagaatgtgacacaaccactgaagtttttatatccattggaaattagta 398

                                                                       
Query: 61  tcaaggagaaaatagaagctatagcaaggtcatatggtgctcaaggtgtcgagtactcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tcaaggagaaaatagaagctatagcaaggtcatatggtgctcaaggtgtcgagtactcag 338

                                                                       
Query: 121 agcaggctgagaagcaaattgagatgtacagcagacagggattctctggtctacctattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agcaggctgagaagcaaattgagatgtacagcagacagggattctctggtctacctattt 278

                                                                       
Query: 181 gcatggccaaaacccagtattcattttcccacaatgcaagtgagaagggagcacccagcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gcatggccaaaacccagtattcattttcccacaatgcaagtgagaagggagcacccagcg 218

                                                                       
Query: 241 gatttgttttaccgataagggatgtaagagcaagcattggagctggtttcatttatcctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gatttgttttaccgataagggatgtaagagcaagcattggagctggtttcatttatcctt 158

                                                                       
Query: 301 tagttgggacaatgagtacaatgccaggacttccgacaaggccttgcttttatgacatcg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tagttgggacaatgagtacaatgccaggacttccgacaaggccttgcttttatgacatcg 98

                                                 
Query: 361 atctggacactgccacaggtaaggtaattggcctctcc 398
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 97  atctggacactgccacaggtaaggtaattggcctctcc 60