Jatropha Genome Database

JcCB0694581.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0694581.10 - phase: 0 /partial
         (262 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10063                                                            476   e-134

>KJC_c10063 
          Length = 691

 Score =  476 bits (240), Expect = e-134
 Identities = 254/256 (99%), Gaps = 2/256 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   cctgggggatggacagcaattcttgtctctttggacaatgtcggagtatggaatctcaga 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cctgggggatggacagcaattcttgtctctttggacaatgtcggagtatggaatctcaga 371

                                                                       
Query: 67  gttgagaaccttgatcgatggtatctaggccatgaaacatacatgagaatcatcaatcct 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gttgagaaccttgatcgatggtatctaggccatgaaacatacatgagaatcatcaatcct 431

                                                                       
Query: 127 gaggaaaatggtgaaacagagatgggtccgcctgataatgttagatattgtggcgccctt 186
           ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 432 gaggaaaatggtgaaacagagat-ggtccg-ctgataatgttagatattgtggcgccctt 489

                                                                       
Query: 187 cgttccttgcagaagactgataattctgcagctatctctattcttattagtaagctggaa 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cgttccttgcagaagactgataattctgcagctatctctattcttattagtaagctggaa 549

                           
Query: 247 ctgtatatttctctgc 262
           ||||||||||||||||
Sbjct: 550 ctgtatatttctctgc 565