Jatropha Genome Database
- JcCB0693601.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0693601.10 + phase: 0
(1002 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01321 1265 0.0
KJC_c01524 1094 0.0
KJC_c00127 101 3e-21
>KJC_c01321
Length = 863
Score = 1265 bits (638), Expect = 0.0
Identities = 652/654 (99%), Gaps = 2/654 (0%)
Strand = Plus / Minus
Query: 350 ttttccctggagctcagtcttatcctcatcgcagcttcactgaagaagttgctgtcctag 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ttttccctggagctcagtcttatcctcatcgcagcttcactgaagaagttgctgtcctag 750
Query: 410 atgattatttcggcaaacttggtgggggcagtatggcttatgtaatgggtgggtctgaca 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 atgattatttcggcaaacttggtgggggcagtatggcttatgtaatgggtgggtctgaca 690
Query: 470 gtgacagcccacagaaatggcatgtttactctgcatatgcagattctgctatctcccgcg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtgacagcccacagaaatggcatgtttactctgcatatgcagattctgctatctcccgcg 630
Query: 530 accttgtttacactgtagagatgtgcatgactggtttggaccggcagaaggctgct-gtt 588
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 629 accttgtttacactgtagagatgtgcatgactggtttggaccggcagaaggctgcttgtt 570
Query: 589 ttcttcaagactcgatcagcttctgcagctgtcatgactgttgattctggcataagaaag 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttcttcaagactcgatcagcttctgcagctgtcatgactgttgattctggcataagaaag 510
Query: 649 attcttccagactcgaaaatatgcgattttgattttgatccatgtggttactcaatgaat 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 attcttccagactcgaaaatatgcgattttgattttgatccatgtggttactcaatgaat 450
Query: 709 tcaattgaaggttctgctatatctaccattcatattactccagaagatggtttcagctat 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcaattgaaggttctgctatatctaccattcatattactccagaagatggtttcagctat 390
Query: 769 gctagctttgaaacagtaggatatcatccagaagaagtgaatctgaaccagttggttgac 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gctagctttgaaacagtaggatatcatccagaagaagtgaatctgaaccagttggttgac 330
Query: 829 agggtgttgtcttgtttccagccaagccaattctccattgctgtgcatgctgatgttgct 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agggtgttgtcttgtttccagccaagccaattctccattgctgtgcatgctgatgttgct 270
Query: 889 ggtaaacaactaatgcggacttgttcacttgatgtcaagggatactgtcgtggagagagt 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggtaaacaactaatgcggacttgttcacttgatgtcaagggatactgtcgtggagagagt 210
Query: 949 agctttgaagagttttgggaagggtggttcacttgtctaccagaagttcattag 1002
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agctttgaagag-tttgggaagggtggttcacttgtctaccagaagttcattag 157
Score = 105 bits (53), Expect = 2e-22
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 287 tgaagctgtctaatgctctgtcccttaaagtgaaatccgtgaggtacactcgt 339
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tgaagctgtctaatgctctgtcccttaaagtgaaatccgtgaggtacactcgt 863
>KJC_c01524
Length = 1484
Score = 1094 bits (552), Expect = 0.0
Identities = 560/563 (99%)
Strand = Plus / Plus
Query: 1 atggcggtctctgcaattggttttgaaggttatgagaagaggctagaaataacatttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 atggcggtctctgcaattggttttgaaggttatgagaagaggctagaaataacatttttt 981
Query: 61 gagcctggcattttcgttgatcctgaaggaaagggacttcgagctctctccaaggctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 gagcctggcattttcgttgatcctgaaggaaagggacttcgagctctctccaaggctcag 1041
Query: 121 ttggatgagtttcttggacctgctgaatgtactattgttgattcattgaaaaatgaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 ttggatgagtttcttggacctgctgaatgtactattgttgattcattgaaaaatgaccat 1101
Query: 181 gttgactcttatgtcctttctgagtctagcctctttatatatccttacaagcttataatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 gttgactcttatgtcctttctgagtctagcctctttatatatccttacaagcttataatc 1161
Query: 241 aaaacctgtgggactacaaagctgcttcttgcaatcccaccaattttgaagctgtctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 aaaacctgtgggactacaaagctgcttcttgcaatcccaccaattttgaagctgtctaat 1221
Query: 301 gctctgtcccttaaagtgaaatccgtgaggtacactcgtgggagcttcattttccctgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 gctctgtcccttaaagtgaaatccgtgaggtacactcgtgggagcttcattttccctgga 1281
Query: 361 gctcagtcttatcctcatcgcagcttcactgaagaagttgctgtcctagatgattatttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 gctcagtcttatcctcatcgcagcttcactgaagaagttgctgtcctagatgattatttc 1341
Query: 421 ggcaaacttggtgggggcagtatggcttatgtaatgggtgggtctgacagtgacagccca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 ggcaaacttggtgggggcagtatggcttatgtaatgggtgggtctgacagtgacagccca 1401
Query: 481 cagaaatggcatgtttactctgcatatgcagattctgctatctcccgcgaccttgtttac 540
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1402 cagaaatggcatgtttactctgcatatgcagattctgctatcctccgcgaccttgtttac 1461
Query: 541 actgtagagatgtgcatgactgg 563
||||||| |||||||||||||||
Sbjct: 1462 actgtagngatgtgcatgactgg 1484
>KJC_c00127
Length = 1728
Score = 101 bits (51), Expect = 3e-21
Identities = 231/291 (79%)
Strand = Plus / Minus
Query: 142 gctgaatgtactattgttgattcattgaaaaatgaccatgttgactcttatgtcctttct 201
|||||||| || ||||||||||| | |||||| ||||||||||||||||| |||||
Sbjct: 1103 gctgaatgcaccattgttgattctctttcaaatgatcatgttgactcttatgttctttca 1044
Query: 202 gagtctagcctctttatatatccttacaagcttataatcaaaacctgtgggactacaaag 261
|| ||||| |||||||| || || ||||| |||| |||||||| ||||||||||| ||
Sbjct: 1043 gaatctagtctctttatttacccatacaaagttatcatcaaaacttgtgggactaccaaa 984
Query: 262 ctgcttcttgcaatcccaccaattttgaagctgtctaatgctctgtcccttaaagtgaaa 321
|||||||| |||||||| ||||| | || || || | | || || || | || |
Sbjct: 983 ttgcttctttcaatcccagcaattcttaaattggctggtaccctctcactcactgtacat 924
Query: 322 tccgtgaggtacactcgtgggagcttcattttccctggagctcagtcttatcctcatcgc 381
|| |||||||| |||| ||||||||||| || ||||| |||||||||| ||| |||||
Sbjct: 923 tctgtgaggtattctcgcgggagcttcatatttcctggggctcagtcttttccgcatcgt 864
Query: 382 agcttcactgaagaagttgctgtcctagatgattatttcggcaaacttggt 432
|||||| |||| || || |||||||| |||| |||| ||||||||||||
Sbjct: 863 agcttctctgaggaggtggctgtccttgatggccattttggcaaacttggt 813
Score = 67.9 bits (34), Expect = 4e-11
Identities = 94/114 (82%)
Strand = Plus / Minus
Query: 667 atatgcgattttgattttgatccatgtggttactcaatgaattcaattgaaggttctgct 726
||||| |||||||||||||| || ||||| ||||| |||||||| || ||||| |||
Sbjct: 584 atatgtgattttgattttgagccttgtggctactctatgaattccatcgaagggggtgca 525
Query: 727 atatctaccattcatattactccagaagatggtttcagctatgctagctttgaa 780
|| ||||| || ||| ||||||| ||||| || || |||||||| |||||||||
Sbjct: 524 atttctacaatccatgttactccggaagacggatttagctatgcaagctttgaa 471