Jatropha Genome Database

JcCB0691701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0691701.10 + phase: 0 
         (174 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05308                                                            214   5e-56

>KJC_c05308 
          Length = 731

 Score =  214 bits (108), Expect = 5e-56
 Identities = 115/116 (99%), Gaps = 1/116 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagcagcgtatggagcaatgaagccggccaaggctgggttggaggaaccccaggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  atggcagcagcgtatggagcaatgaagccggccaaggctgggttggaggaaccccaggag 130

                                                                   
Query: 61  cagattcacaagatcagaatcactctgtcctcaaagaatgtcaaaaacctcgaaaa 116
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 131 cagattcacaagatcagaatcactctgtcctcaaagaatgtc-aaaacctcgaaaa 185