Jatropha Genome Database

JcCB0689361.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0689361.10 + phase: 0 /pseudo/partial
         (548 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01752                                                            922   0.0  

>KJC_c01752 
          Length = 1131

 Score =  922 bits (465), Expect = 0.0
 Identities = 472/473 (99%), Gaps = 1/473 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtggcaaaggaaagtgctgatgtcataattttggatgacaacttctccacaattgtgact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gtggcaaaggaaagtgctgatgtcataattttggatgacaacttctccacaattgtgact 756

                                                                       
Query: 61  gtggcaaaatggggccgttcagtttatataaacattcaaaaatttgttcagtttcaattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gtggcaaaatggggccgttcagtttatataaacattcaaaaatttgttcagtttcaattg 696

                                                                       
Query: 121 actgttaacgtagttgccctgattgtcaacttttctgcagcctgtttgacaggtaatgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 actgttaacgtagttgccctgattgtcaacttttctgcagcctgtttgacaggtaatgct 636

                                                                       
Query: 181 cccttaactgctgttcaacttctctgggtcaatatgatcatggatactctaggagcacta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cccttaactgctgttcaacttctctgggtcaatatgatcatggatactctaggagcacta 576

                                                                       
Query: 241 gcactagccacagagcctcctaaagaggacctgatgaagagatcaccagttggcaggaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gcactagccacagagcctcctaaagaggacctgatgaagagatcaccagttggcaggaaa 516

                                                                       
Query: 301 ggaaatttcataagcaatgtaatgtggaggaatattctggggcagtcgatgtatcagttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaaatttcataagcaatgtaatgtggaggaatattctggggcagtcgatgtatcagttt 456

                                                                       
Query: 361 gtgatgatatggtatcttcagacaagaggaaaagaaatttttcatcttgacggcccagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gtgatgatatggtatcttcagacaagaggaaaagaaatttttcatcttgacggcccagat 396

                                                                
Query: 421 tctgatttaatattgaacacgcttatttttaatgcatttgtcttttgtcaggt 473
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 395 tctgatttaatattgaacacgctta-ttttaatgcatttgtcttttgtcaggt 344