Jatropha Genome Database

JcCB0684951.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0684951.10 - phase: 0 /partial
         (417 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04354                                                            787   0.0  

>KJC_c04354 
          Length = 1399

 Score =  787 bits (397), Expect = 0.0
 Identities = 404/405 (99%), Gaps = 1/405 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gagcttatacaatacttgaagtacacttgccctgctcatctatatgcaacctcaatctcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gagcttatacaatacttgaagtacacttgccctgctcatctatatgcaacctcaatctcg 697

                                                                       
Query: 61  cctccagctgcagaacaaataatatctgccataaaggttattcttggggaagatggttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cctccagctgcagaacaaataatatctgccataaaggttattcttggggaagatggttct 637

                                                                       
Query: 121 aatagaggtgctcagaaacttgcacgaatacgtgaaaatagcaacttctttaggtcagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aatagaggtgctcagaaacttgcacgaatacgtgaaaatagcaacttctttaggtcagaa 577

                                                                       
Query: 181 ttgataaaaatggggtttgaggttcttggagacaatgactctcctgtaatgccaattatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttgataaaaatggggtttgaggttcttggagacaatgactctcctgtaatgccaattatg 517

                                                                       
Query: 241 ctttacaatccagctaaaattcccgccttttcaa-gggagtgcctgaggcagaatgtggc 299
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 516 ctttacaatccagctaaaattcccgccttttcaacgggagtgcctgaggcagaatgtggc 457

                                                                       
Query: 300 agttgtgacagtggcttttccagcaacaccactattgttggctagggcacgcatatgcat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agttgtgacagtggcttttccagcaacaccactattgttggctagggcacgcatatgcat 397

                                                        
Query: 360 atctgcttctcataccaaggaagacctgattaaagcattggaagt 404
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atctgcttctcataccaaggaagacctgattaaagcattggaagt 352