Jatropha Genome Database

JcCB0652571.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0652571.10 + phase: 1 /pseudo/partial
         (390 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02329                                                            668   0.0  

>KJC_c02329 
          Length = 1007

 Score =  668 bits (337), Expect = 0.0
 Identities = 340/341 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcttgatgtgtacaacgacaagatctagcaccttctcgaaccggaaacactcacttggg 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 170 ctcttgatgtgtacaacgacaagatcaagcaccttctcgaaccggaaacactcacttggg 229

                                                                       
Query: 61  cggaccggatccagttccaccgcctcaatatcaagcatgactctcgtcttgaaggcttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 cggaccggatccagttccaccgcctcaatatcaagcatgactctcgtcttgaaggcttaa 289

                                                                       
Query: 121 tcaagatgtcggatctgactataaatctggcggcgatctgtacaccggccgattacaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tcaagatgtcggatctgactataaatctggcggcgatctgtacaccggccgattacaata 349

                                                                       
Query: 181 cacgtccattagacacgatttacagcaattttattgatgcgctccctgtggtgaagtact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cacgtccattagacacgatttacagcaattttattgatgcgctccctgtggtgaagtact 409

                                                                       
Query: 241 gttcggagaacaacaagcgtctaattcacttctccacttgcgaggtgtatggaaaaacta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gttcggagaacaacaagcgtctaattcacttctccacttgcgaggtgtatggaaaaacta 469

                                                    
Query: 301 ttggaagctttcttcctaaagatagccctcttcgtcaggat 341
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttggaagctttcttcctaaagatagccctcttcgtcaggat 510