Jatropha Genome Database

JcCB0645591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0645591.10 - phase: 0 /pseudo
         (285 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02382                                                            404   e-113

>KJC_c02382 
          Length = 1046

 Score =  404 bits (204), Expect = e-113
 Identities = 204/204 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgttccggctttctatcggtggttagccgagaagtatccgttagttgtggtggat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99  atgggtgttccggctttctatcggtggttagccgagaagtatccgttagttgtggtggat 158

                                                                       
Query: 61  gtaatcgaggaagaatcagtggttatcgatggagttaacataccagtggatacgagtaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gtaatcgaggaagaatcagtggttatcgatggagttaacataccagtggatacgagtaga 218

                                                                       
Query: 121 cctaatcctaacagcatcgaatatgataatttatatctcgacatgaacgggattattcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cctaatcctaacagcatcgaatatgataatttatatctcgacatgaacgggattattcac 278

                                   
Query: 181 ccttgcttccaccccgaagacaga 204
           ||||||||||||||||||||||||
Sbjct: 279 ccttgcttccaccccgaagacaga 302