Jatropha Genome Database
- JcCB0644101.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0644101.10 + phase: 1 /partial
(643 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01639 961 0.0
KJC_c08663 385 e-107
KJC_s19430 113 5e-25
>KJC_c01639
Length = 1158
Score = 961 bits (485), Expect = 0.0
Identities = 488/489 (99%)
Strand = Plus / Minus
Query: 153 gttttcaatcccttgttagacttggccaaaaaactcaaactcaaaatttatcttaatgac 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 gttttcaatcccttgttagacttggccaaaaaactcaaactcaaaatttatcttaatgac 1099
Query: 213 taccaaaatatcacatccaacacatataaacagaatggtggactctacccaaaacaagtg 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 taccaaaatatcacatccaacacatataaacagaatggtggactctacccaaaacaagtg 1039
Query: 273 gtggagaaaattgataaggtggccactgcaatggatgatttctgcgcagcgttttcgaaa 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gtggagaaaattgataaggtggccactgcaatggatgatttctgcgcagcgttttcgaaa 979
Query: 333 aaactatctgtccagaaaaaggatatcgatgtctcaattttggctgcacagcgtatattc 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 aaactatctgtccagaaaaaggatatcgatgtctcaattttggctgcacagcgtatattc 919
Query: 393 aagaaggcacccacaagtccacttgaaatggtaatagattactatcacaatgactttgaa 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 aagaaggcacccacaagtccacttgaaatggtaatagattactatcacaatgactttgaa 859
Query: 453 gacgcagagccaccaaaagtaacaagtttgaagcacacataccctagaaacgagttggta 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gacgcagagccaccaaaagtaacaagtttgaagcacacataccctagaaacgagttggta 799
Query: 513 gaccatggagaggatgaatactttgtggctgatcctagaggctttgagattatagttcaa 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gaccatggagaggatgaatactttgtggctgatcctagaggctttgagattatagttcaa 739
Query: 573 tatcttgctaaacagtttctgtcttctttgactaaagatcccaggctcaagcttaacaag 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tatcttgctaaacagtttctgtcttctttgactaaagatcccaggctcaagcttaacaag 679
Query: 633 gtaattaga 641
||| |||||
Sbjct: 678 gtagttaga 670
>KJC_c08663
Length = 408
Score = 385 bits (194), Expect = e-107
Identities = 334/378 (88%), Gaps = 2/378 (0%)
Strand = Plus / Plus
Query: 252 ggactctacccaaaacaagtggtggagaaaattgataaggtggccactgcaatggatgat 311
|||||||||||||||||| | |||||| || |||| |||| |||||||||| |||||||
Sbjct: 31 ggactctacccaaaacaactagtggaggaagttgaagaggtagccactgcaagggatgat 90
Query: 312 ttctgcgcagcgttttcgaaaaaactatctgtccagaaaaaggatatcgatgtctcaatt 371
||||||| ||| ||||||||||||||||||| | ||||||||||||| || ||||| |||
Sbjct: 91 ttctgcgaagctttttcgaaaaaactatctgccaagaaaaaggatattgacgtctctatt 150
Query: 372 ttggctgcacagcgtatattcaagaaggcacccacaagtccacttgaaatggtaatagat 431
|||||||| || || || | || |||| ||||| || |||||||||||||||| |||||
Sbjct: 151 ttggctgctcaacgcatgtccagaaaggtacccagaactccacttgaaatggtagtagat 210
Query: 432 tactatcacaatgactttgaagacgcagagccaccaaaagtaacaagtttgaagcacaca 491
|||||||| ||||||| |||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 211 tactatcataatgactatgaagatggagagccgccaaaagtaacaagtttgaagcacaca 270
Query: 492 taccctagaaacgagttggtagaccatggagaggatgaatactttgtggctgatcctaga 551
|| || ||||||||||| |||||||||||||||||| |||||| |||||||||||||||
Sbjct: 271 tatcccagaaacgagtttgtagaccatggagaggatccatacttcgtggctgatcctaga 330
Query: 552 ggctttgagattatag-ttcaatatcttgctaaacagtttctgtcttctttgactaaaga 610
|| ||||||||||||| || |||||||||||||||||||||| || |||||||||| |||
Sbjct: 331 gg-tttgagattatagttttaatatcttgctaaacagtttctttcgtctttgactacaga 389
Query: 611 tcccaggctcaagcttaa 628
||||||||| ||||||||
Sbjct: 390 tcccaggcttaagcttaa 407
>KJC_s19430
Length = 478
Score = 113 bits (57), Expect = 5e-25
Identities = 148/177 (83%), Gaps = 1/177 (0%)
Strand = Plus / Plus
Query: 466 caaaagtaacaagtttgaagcacacataccctagaaacgagttg-gtagaccatggagag 524
||||||||||||| |||||||||| ||| || ||||||||||| ||||||||||||
Sbjct: 1 caaaagtaacaagcttgaagcacaaatatcccagaaacgagttttgtagaccatggaccc 60
Query: 525 gatgaatactttgtggctgatcctagaggctttgagattatagttcaatatcttgctaaa 584
| | || |||| ||| ||||||||||||||||||| |||||| || ||||||||||
Sbjct: 61 gttccatgctttctggttgatcctagaggctttgaggccatagttgaagatcttgctaag 120
Query: 585 cagtttctgtcttctttgactaaagatcccaggctcaagcttaacaaggtaattaga 641
|||||||| || ||||||||| | ||||||| ||| |||||||| |||||| |||||
Sbjct: 121 cagtttctttcctctttgactgaggatcccaagcttaagcttaataaggtagttaga 177