Jatropha Genome Database

JcCB0639901.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0639901.10 + phase: 0 /partial
         (831 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10063                                                            593   e-169
KJC_c01983                                                            224   3e-58

>KJC_c10063 
          Length = 691

 Score =  593 bits (299), Expect = e-169
 Identities = 306/307 (99%), Gaps = 1/307 (0%)
 Strand = Plus / Plus

                                                                       
Query: 525 tggaatatcatttgtcaatccagatacaccaatcaggcttgctgacctgcacaaagtgaa 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggaatatcatttgtcaatccagatacaccaatcaggcttgctgacctgcacaaagtgaa 60

                                                                       
Query: 585 gggagtgtacaagcttgattttcccaataagccacttgataggcctctccggatggacac 644
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gggagtgtacaagcttgattttcccaataagccacttgataggcctctccggatggacac 120

                                                                       
Query: 645 atctgttattaatgctacatataaggggtttatccaggtcatactacagaacaacgacac 704
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctgttattaatgctacatataaggggtttatccaggtcatactacagaacaacgacac 180

                                                                       
Query: 705 caaaatgctgagctttcacatggatggttattcgttttttgtggttggaatggactgggg 764
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 caaaatgctgagctttcacatggatggttattcg-tttttgtggttggaatggactgggg 239

                                                                       
Query: 765 ggtgtggtctgaggacaaaaagagttcgtataataactgggatgctatttctcgctgcac 824
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggtgtggtctgaggacaaaaagagttcgtataataactgggatgctatttctcgctgcac 299

                  
Query: 825 agtagag 831
           |||||||
Sbjct: 300 agtagag 306


>KJC_c01983 
          Length = 836

 Score =  224 bits (113), Expect = 3e-58
 Identities = 113/113 (100%)
 Strand = Plus / Minus

                                                                       
Query: 17  caggcaaaacttatcgatttcgtgttcacaatgttgggacttcaactagtttgaacttca 76
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 caggcaaaacttatcgatttcgtgttcacaatgttgggacttcaactagtttgaacttca 54

                                                                
Query: 77  gaatccagggtcacaatctgctccttgtggaaacagaaggacattatacatcc 129
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  gaatccagggtcacaatctgctccttgtggaaacagaaggacattatacatcc 1