Jatropha Genome Database

JcCB0603751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0603751.10 - phase: 0 /partial
         (425 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01931                                                            811   0.0  

>KJC_c01931 
          Length = 1050

 Score =  811 bits (409), Expect = 0.0
 Identities = 412/413 (99%)
 Strand = Plus / Plus

                                                                       
Query: 13  ttagaagttattgaagcccattatttgttgggagctgactatgataatattgagatagta 72
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 370 ttagaagttattgaagcccattatttgtttggagctgactatgataatattgagatagta 429

                                                                       
Query: 73  attcatccacaatctataatacattcaatggttgaaacagaggattcttctgttcttgca 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 attcatccacaatctataatacattcaatggttgaaacagaggattcttctgttcttgca 489

                                                                       
Query: 133 cagttggggtggcccgatatgcgcttaccaattctatacaccatgtcatggccagacaga 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cagttggggtggcccgatatgcgcttaccaattctatacaccatgtcatggccagacaga 549

                                                                       
Query: 193 atttcctgctctgaaataacctggcctcgccttgatctttgcaagcaagggtctctaaca 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atttcctgctctgaaataacctggcctcgccttgatctttgcaagcaagggtctctaaca 609

                                                                       
Query: 253 tttaaagctcctgacaatgtaaaatacccatctatggatcttgcctatgctgctggaagg 312
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tttaaagctcctgacaatgtaaaatacccatctatggatcttgcctatgctgctggaagg 669

                                                                       
Query: 313 gcaggaggcaccatgacaggagttcttagtgcagctaatgagaaagctgtggagatgttc 372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gcaggaggcaccatgacaggagttcttagtgcagctaatgagaaagctgtggagatgttc 729

                                                                
Query: 373 atcgatgaaaagataagctatcttgacattttcaagattgtggagctaacttg 425
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 atcgatgaaaagataagctatcttgacattttcaagattgtggagctaacttg 782