Jatropha Genome Database
- JcCB0603551.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0603551.10 - phase: 0 /partial
(638 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c10112 438 e-123
KJC_c01073 119 9e-27
KJC_c08653 60 7e-09
>KJC_c10112
Length = 397
Score = 438 bits (221), Expect = e-123
Identities = 242/245 (98%), Gaps = 3/245 (1%)
Strand = Plus / Minus
Query: 22 agtgttattgtggaagcttt-gaaggtggatagtttgcaaagactttgctcatctttgga 80
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 243 agtgttattgtggaagcttttgaaggtg-atagtttgcaaagactttgctcatctttgga 185
Query: 81 acctttgtttcgcagaattgttagcgaagaagtggagcgtgctctgacaagattgggtca 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 acctttgtttcgcagaattgttagcgaagaagtggagcgtgctctgacaagattgggtca 125
Query: 141 tgctaagttggctacaaggtcaccaccaaaaatccaagggccagaaggaaaaaggctgca 200
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 124 tgctaagttggctacaaggtcaccaccaaaaatccaagggccag-aggaaaaaggctgca 66
Query: 201 acttcatttcagaacaagaatgcctcctcacttattcacaggtgggaaggttgacgggga 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 acttcatttcagaacaagaatgcctcctcacttattcacaggtgggaaggttgacgggga 6
Query: 261 acaag 265
|||||
Sbjct: 5 acaag 1
>KJC_c01073
Length = 2260
Score = 119 bits (60), Expect = 9e-27
Identities = 242/300 (80%), Gaps = 2/300 (0%)
Strand = Plus / Minus
Query: 340 aaactaaatgttgtggttctggaaggtgactttaacgaggaggccgatgaagattggacc 399
|||||| |||||||||| || |||||||| |||||| | || | |||||||| |||||
Sbjct: 1751 aaactagatgttgtggtgcttgaaggtgattttaacaatgaagatgatgaagactggaca 1692
Query: 400 ttagaacactttgaaagccatgaagtgaaagaacgtgaagggaaaagacctctgctgact 459
||| | |||||||| |||| || ||||| |||||||| || ||||| ||| |||||
Sbjct: 1691 caggaagaatttgaaagtcatgttgtaaaagagcgtgaaggaaagagaccactgttgact 1632
Query: 460 ggagagctacaggtgactctcaaggaaggggtaggaactcttggagatcttactttcact 519
|| || | || ||||| || ||||||||||| ||||| || || || |||||||| ||
Sbjct: 1631 ggggacttgcaagtgaccctgaaggaaggggttggaacactgggggagcttacttttacc 1572
Query: 520 gataattctagctggataagaagcagaaagttcaggcttggtcttaaggtt-tctcctgg 578
||||| || ||||||||||| ||||| ||||| |||||||| || |||||| ||| ||||
Sbjct: 1571 gataactcgagctggataaggagcaggaagtttaggcttggcctgaaggttgtct-ctgg 1513
Query: 579 atattgtgaaggtattcgtgttcgtgaggctaaaacagaggcatttgctggtaaagatca 638
|| || ||| |||||||| ||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 1512 attttttgagggtattcgcattcgtgaggctaagacagaggcttttactgtgaaagatca 1453
>KJC_c08653
Length = 596
Score = 60.0 bits (30), Expect = 7e-09
Identities = 99/122 (81%)
Strand = Plus / Minus
Query: 484 gaaggggtaggaactcttggagatcttactttcactgataattctagctggataagaagc 543
||||| ||||||||||| ||||| | || || ||||| || || |||||||| ||||||
Sbjct: 219 gaaggtgtaggaactctaggagagttgacatttactgacaactcaagctggattagaagc 160
Query: 544 agaaagttcaggcttggtcttaaggtttctcctggatattgtgaaggtattcgtgttcgt 603
|| ||||| ||||| || | |||||||| || || ||||||||||| ||||| |||||
Sbjct: 159 aggaagtttaggctaggattgaaggtttccccaggctattgtgaaggggttcgtattcgt 100
Query: 604 ga 605
||
Sbjct: 99 ga 98