Jatropha Genome Database

JcCB0601851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0601851.10 + phase: 1 /pseudo/partial
         (258 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04849                                                            511   e-145

>KJC_c04849 
          Length = 814

 Score =  511 bits (258), Expect = e-145
 Identities = 258/258 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gactagcgggtgccactgctgatgttcactgttatgacgtgttaacaaataaatggtcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gactagcgggtgccactgctgatgttcactgttatgacgtgttaacaaataaatggtcta 492

                                                                       
Query: 61  ggattactccttttggagaaccacccactccaagggctgctcatgtggctactgctgtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggattactccttttggagaaccacccactccaagggctgctcatgtggctactgctgtgg 432

                                                                       
Query: 121 gaaccatggttgttattcagggtggaatcggtccagctggcctgtccgctgaggatcttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaaccatggttgttattcagggtggaatcggtccagctggcctgtccgctgaggatcttc 372

                                                                       
Query: 181 atgttcttgacctcacacaacaacggccacgatggcatagagttgttgttcaaggtcctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atgttcttgacctcacacaacaacggccacgatggcatagagttgttgttcaaggtcctg 312

                             
Query: 241 gaccagggccacgatatg 258
           ||||||||||||||||||
Sbjct: 311 gaccagggccacgatatg 294