Jatropha Genome Database

JcCB0597261.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0597261.10 - phase: 0 /partial
         (541 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08192                                                            902   0.0  

>KJC_c08192 
          Length = 772

 Score =  902 bits (455), Expect = 0.0
 Identities = 462/463 (99%), Gaps = 1/463 (0%)
 Strand = Plus / Plus

                                                                       
Query: 79  cttaaaccccaattactcttcactccctcgctttcccaccaaaatgcctcttttcggcgg 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cttaaaccccaattactcttcactccctcgctttcccaccaaaatgcctcttttcggcgg 60

                                                                       
Query: 139 gaaacacgggcatttgccggccggagcaagaacaaacagggacctcggatagatttggac 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaaacacgggcatttgccggccggagcaagaacaaacagggacctcggatagatttggac 120

                                                                       
Query: 199 ccaggatatctccggcgaattagggaaaacgcgcgtaggaaagcacggaagctgtcagaa 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaggatatctccggcgaattagggaaaacgcgcgtaggaaagcacggaagctgtcagaa 180

                                                                       
Query: 259 tccctcttttaccggataaaaaacccgcataagatccatgccgataacttcacagaggag 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccctcttttaccggataaaaaacccgcataagatccatgccgataacttcacagaggag 240

                                                                       
Query: 319 gagctcaacttaattggtcttgggtacgatcggatggtccgtttcatggagaaagacgac 378
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 gagctcaacttaattggtcttgggtacgatcggatgg-ccgtttcatggagaaagacgac 299

                                                                       
Query: 379 ccaaatctcaaacatccatacgattggtacaagtatggtgagtttggaccgtactcatgg 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccaaatctcaaacatccatacgattggtacaagtatggtgagtttggaccgtactcatgg 359

                                                                       
Query: 439 cgcggagtggttcttggggatccaatagcaggtcgttttactgatgagcgcgttacgctg 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cgcggagtggttcttggggatccaatagcaggtcgttttactgatgagcgcgttacgctg 419

                                                      
Query: 499 tacagcgaagttaaagaccaggaagagtgggagaagattgaac 541
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tacagcgaagttaaagaccaggaagagtgggagaagattgaac 462