Jatropha Genome Database

JcCB0590911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0590911.10 - phase: 0 /partial
         (182 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05142                                                            361   e-100

>KJC_c05142 
          Length = 567

 Score =  361 bits (182), Expect = e-100
 Identities = 182/182 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcagttgacggtcagcaccttattcttcatcctttaaacatgaagtgtcttctacaccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcagttgacggtcagcaccttattcttcatcctttaaacatgaagtgtcttctacaccat 231

                                                                       
Query: 61  tatgggagctatgatatgcttcctcagaggataaacggaacaattttgcagttggaaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tatgggagctatgatatgcttcctcagaggataaacggaacaattttgcagttggaaaca 171

                                                                       
Query: 121 gtgactcagtcagaagcaatgagaaggcgatatcgatatctaagtcacttttcattaacg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gtgactcagtcagaagcaatgagaaggcgatatcgatatctaagtcacttttcattaacg 111

             
Query: 181 ac 182
           ||
Sbjct: 110 ac 109