Jatropha Genome Database
- JcCB0589561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0589561.10 - phase: 2 /partial
(879 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08395 1128 0.0
KJC_c10645 210 4e-54
>KJC_c08395
Length = 656
Score = 1128 bits (569), Expect = 0.0
Identities = 576/577 (99%), Gaps = 1/577 (0%)
Strand = Plus / Plus
Query: 304 gttaccggagattgattccgatgacatagtgtcggcttttgaagggaactcgaatctgtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttaccggagattgattccgatgacatagtgtcggcttttgaagggaactcgaatctgtt 60
Query: 364 ttgggctgagcgtttt-ggcaaacagtttctgggcatgaatgatttgtgggttaaacact 422
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgggctgagcgtttttggcaaacagtttctgggcatgaatgatttgtgggttaaacact 120
Query: 423 gcggcattagccatactggtagctttaaggatctgggcatgaccgttctggtcagccaag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggcattagccatactggtagctttaaggatctgggcatgaccgttctggtcagccaag 180
Query: 483 tgaaccgtttgcgcaaaatgaaacagcctgttgttggagtcggctgcgcgtccactggag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaaccgtttgcgcaaaatgaaacagcctgttgttggagtcggctgcgcgtccactggag 240
Query: 543 acacctcggcagcactttctgcttattgtgcatctgcaggaattccatcgatcgttttct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacctcggcagcactttctgcttattgtgcatctgcaggaattccatcgatcgttttct 300
Query: 603 tgcccgtaaacaagatctcaatggcgcaattggtgcagccaattgcaaatggagcttttg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcccgtaaacaagatctcaatggcgcaattggtgcagccaattgcaaatggagcttttg 360
Query: 663 tattgagcatagacactgattttgatgggtgcatgaaactaattcgtgaggttacagccg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tattgagcatagacactgattttgatgggtgcatgaaactaattcgtgaggttacagccg 420
Query: 723 aattgccaatttatttagcgaattctctgaacagtttgaggctagaaggtcaaaaaactg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aattgccaatttatttagcgaattctctgaacagtttgaggctagaaggtcaaaaaactg 480
Query: 783 ctgcaattgagattttgcagcagttcaattgggaagtgccagattgggttatagttccag 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgcaattgagattttgcagcagttcaattgggaagtgccagattgggttatagttccag 540
Query: 843 gtggtaatttagggaatatatatgccttttacaaagg 879
|||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtggtaatttagggaatatatatgccttttacaaagg 577
>KJC_c10645
Length = 641
Score = 210 bits (106), Expect = 4e-54
Identities = 227/266 (85%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 614 aagatctcaatggcgcaattggtgcagccaattgcaaatggagcttttgtattgagcata 673
||||| || ||||| ||||| |||||||| ||||| ||||| ||||| || ||||| |
Sbjct: 341 aagatttccatggcacaattagtgcagcctattgctaatggggcttt-gttttgagtgtt 283
Query: 674 gacactgattttgatgggtgcatgaaactaattcgtgaggttacagccgaattgccaatt 733
|| |||||||||||||| |||||| | |||| | ||| |||| || || |||||||||
Sbjct: 282 gatactgattttgatggttgcatgcagttaataagagagattactgctgagttgccaatt 223
Query: 734 tatttagcgaattctctgaacagtttgaggctagaaggtcaaaaaactgctgcaattgag 793
|||||||| ||||| |||| |||||||| ||||||| |||||||||||||||||||||
Sbjct: 222 tatttagcaaattcattgaatagtttgagattagaagggcaaaaaactgctgcaattgag 163
Query: 794 attttgcagcagttcaattgggaagtgccagattgggttatagttccaggtggtaattta 853
|||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 162 attttgcagcagtttgattgggaagtgcctgattgggttattgttcccggtggtaatttg 103
Query: 854 gggaatatatatgccttttacaaagg 879
|||||||||||||| ||||| |||||
Sbjct: 102 gggaatatatatgctttttataaagg 77