Jatropha Genome Database

JcCB0582281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0582281.10 - phase: 0 
         (255 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05851                                                            260   1e-69

>KJC_c05851 
          Length = 500

 Score =  260 bits (131), Expect = 1e-69
 Identities = 131/131 (100%)
 Strand = Plus / Minus

                                                                       
Query: 50  atcttcgtgaggataaacattatttggctgatcatcctgggctggtagctgtaaccactg 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atcttcgtgaggataaacattatttggctgatcatcctgggctggtagctgtaaccactg 393

                                                                       
Query: 110 cacagggagaggaactccgcaaacagattggcgcggcatattatattgaatgcagctcaa 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cacagggagaggaactccgcaaacagattggcgcggcatattatattgaatgcagctcaa 333

                      
Query: 170 aaactcaacag 180
           |||||||||||
Sbjct: 332 aaactcaacag 322