Jatropha Genome Database

JcCB0580021.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0580021.10 + phase: 1 /partial
         (338 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03683                                                            168   5e-42

>KJC_c03683 
          Length = 1027

 Score =  168 bits (85), Expect = 5e-42
 Identities = 85/85 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1  tgcagagacttatgttacaacctcttcccactaaagtagtatgcctgactcaagttgtta 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tgcagagacttatgttacaacctcttcccactaaagtagtatgcctgactcaagttgtta 26

                                   
Query: 61 atccggatgaacttaaagatgatga 85
          |||||||||||||||||||||||||
Sbjct: 25 atccggatgaacttaaagatgatga 1