Jatropha Genome Database
- JcCB0579241.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0579241.10 + phase: 0 /partial
(790 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03564 872 0.0
KJC_c01682 176 5e-44
KJC_c06231 155 2e-37
KJC_c00976 147 5e-35
KJC_c02030 101 3e-21
KJC_c12964 60 9e-09
>KJC_c03564
Length = 947
Score = 872 bits (440), Expect = 0.0
Identities = 440/440 (100%)
Strand = Plus / Minus
Query: 351 ttgtgatcactacttcaataatagtaaggctattagagaagcaatgtgtttcatgatgga 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 ttgtgatcactacttcaataatagtaaggctattagagaagcaatgtgtttcatgatgga 888
Query: 411 tcctttgcttggaaagagagtgtgctatgtccagttcccacaaaggtttgatggcattga 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 tcctttgcttggaaagagagtgtgctatgtccagttcccacaaaggtttgatggcattga 828
Query: 471 caggcatgatcgatatgccaatcggaatattgtattctttgatataaacatgaaaggttt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 caggcatgatcgatatgccaatcggaatattgtattctttgatataaacatgaaaggttt 768
Query: 531 ggatggcattcaaggacctatatatgttggcactggttgtgtgttcagaaggcaggcgtt 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ggatggcattcaaggacctatatatgttggcactggttgtgtgttcagaaggcaggcgtt 708
Query: 591 ctatggatatgatgctccaaaagcaaagaaactaccgagtaggacgtgcaattgcttgcc 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ctatggatatgatgctccaaaagcaaagaaactaccgagtaggacgtgcaattgcttgcc 648
Query: 651 taagtggtgctgtggatgttgttgttctggaaggataaagaagaagaagactgacaaacc 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 taagtggtgctgtggatgttgttgttctggaaggataaagaagaagaagactgacaaacc 588
Query: 711 taaatctgagatgcagaagaagaattcaaggacatctaaacctgtgagtgttttgaaggg 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 taaatctgagatgcagaagaagaattcaaggacatctaaacctgtgagtgttttgaaggg 528
Query: 771 tactgaagagggcattgaag 790
||||||||||||||||||||
Sbjct: 527 tactgaagagggcattgaag 508
>KJC_c01682
Length = 1341
Score = 176 bits (89), Expect = 5e-44
Identities = 431/545 (79%)
Strand = Plus / Minus
Query: 26 gagcaatgaagagagagtatgaagagtttaaagttcggattaatgcattggttgccaagg 85
|||||||||| ||||| ||||||||||| || || ||||| ||||| | ||||| || |
Sbjct: 1304 gagcaatgaaaagagaatatgaagagttcaaggtgcggatcaatgcccttgttgctaaag 1245
Query: 86 cacaaaaggtcccagaagaagggtggacaatgcaggatgggactccatggccagggaata 145
|||| ||| | || |||||||| ||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 1244 cacagaagatgcctgaagaaggttggacaatgcaagatggtactccttggcctggaaata 1185
Query: 146 atgttcgcgatcatccagggatgattcaagttttccttggccaaagtggagggcttgaca 205
|| | | ||||||||||| ||||| || || ||| | || || | ||| | ||||| |
Sbjct: 1184 atcctagggatcatccaggaatgatccaggtgttcttagggcataatgggagccttgata 1125
Query: 206 cagatggaaatgaactaccacgaatggtgtacgtttccagagaaaagagacctggattta 265
||||||||||| || || || | ||||| ||||| | || || ||||| || ||
Sbjct: 1124 tggatggaaatgagctgcctcgtcttgtgtatgtttctcgtgagaaaagaccaggcttcc 1065
Query: 266 accaccacaaaaaggctggagcaatgaatgctttggtcagggtctctgctgtgctcacaa 325
| || ||||| || ||||||||||||||||| ||| | | || || ||||| | || |
Sbjct: 1064 aacatcacaagaaagctggagcaatgaatgcattgattcgagtttcagctgtcttgacca 1005
Query: 326 atgctccttatctgttgaatttggattgtgatcactacttcaataatagtaaggctatta 385
||| | ||||| |||||| ||||||||||||||||||||||||| || || ||| |||
Sbjct: 1004 atggcgcctatcttttgaatgtggattgtgatcactacttcaataacagcaaagctctta 945
Query: 386 gagaagcaatgtgtttcatgatggatcctttgcttggaaagagagtgtgctatgtccagt 445
|||||||||||| ||||||||||||||| |||| |||| | |||||||| || |
Sbjct: 944 aagaagcaatgtgcttcatgatggatcctgcctttggcaagaaaacatgctatgtacaat 885
Query: 446 tcccacaaaggtttgatggcattgacaggcatgatcgatatgccaatcggaatattgtat 505
|||||||| | |||||||||||||| ||| ||||||||||||||||| |||||||| |
Sbjct: 884 tcccacaacgttttgatggcattgatttgcacgatcgatatgccaatcgtaatattgtgt 825
Query: 506 tctttgatataaacatgaaaggtttggatggcattcaaggacctatatatgttggcactg 565
|||||||||| ||| ||||||| | |||||||| || || || | |||||||| ||||
Sbjct: 824 tctttgatatcaacttgaaagggcttgatggcatccagggtccagtctatgttggtactg 765
Query: 566 gttgt 570
|||||
Sbjct: 764 gttgt 760
>KJC_c06231
Length = 457
Score = 155 bits (78), Expect = 2e-37
Identities = 228/278 (82%)
Strand = Plus / Plus
Query: 305 gggtctctgctgtgctcacaaatgctccttatctgttgaatttggattgtgatcactact 364
||||||||||||| || |||||||||||||||| |||||| |||| |||||||||||
Sbjct: 67 gggtctctgctgttctatcaaatgctccttatcttttgaatgtggactgtgatcactata 126
Query: 365 tcaataatagtaaggctattagagaagcaatgtgtttcatgatggatcctttgcttggaa 424
| || || || || ||| |||||||||| |||||||||||||||||||| || |
Sbjct: 127 ttaacaacagcaaagctcttagagaagctatgtgtttcatgatggatccaacatcaggga 186
Query: 425 agagagtgtgctatgtccagttcccacaaaggtttgatggcattgacaggcatgatcgat 484
||| ||| |||||||||||||| || ||||| |||||||| ||||| | ||||| |||
Sbjct: 187 agaaagtttgctatgtccagtttcctcaaagatttgatggtattgatcgtcatgacagat 246
Query: 485 atgccaatcggaatattgtattctttgatataaacatgaaaggtttggatggcattcaag 544
| | ||||||||| | || ||||||||||| ||||||||||| || ||||| | ||||
Sbjct: 247 actcaaatcggaatgtggtgttctttgatattaacatgaaagggttagatggtttgcaag 306
Query: 545 gacctatatatgttggcactggttgtgtgttcagaagg 582
|||||||||||||||| ||||| ||||| ||| |||||
Sbjct: 307 gacctatatatgttggaactgggtgtgttttccgaagg 344
>KJC_c00976
Length = 1696
Score = 147 bits (74), Expect = 5e-35
Identities = 440/562 (78%)
Strand = Plus / Minus
Query: 16 aaggaacggagagcaatgaagagagagtatgaagagtttaaagttcggattaatgcattg 75
||||| || ||||| ||||||||||| |||||||| |||||||| || |||||| |
Sbjct: 1492 aaggatcgtagagctatgaagagagaatatgaagaatttaaagtccgtgttaatgggctt 1433
Query: 76 gttgccaaggcacaaaaggtcccagaagaagggtggacaatgcaggatgggactccatgg 135
||||| ||||||||||| || || || ||||| |||| ||||| ||||| || ||||||
Sbjct: 1432 gttgcaaaggcacaaaaagttcctgaggaaggatggattatgcaagatggtaccccatgg 1373
Query: 136 ccagggaataatgttcgcgatcatccagggatgattcaagttttccttggccaaagtgga 195
||||| ||||| | || ||||| || ||||| || |||||| | ||||||| ||||
Sbjct: 1372 ccaggaaataacaccagagaccatcctggaatgatccaggttttcttaggccaaaatgga 1313
Query: 196 gggcttgacacagatggaaatgaactaccacgaatggtgtacgtttccagagaaaagaga 255
|| ||||| | || || ||||| || ||||| | || || ||||| | |||||| |
Sbjct: 1312 ggtcttgatgctgagggtaatgagctgccacggctagtttatgtttctcgtgaaaagcgt 1253
Query: 256 cctggatttaaccaccacaaaaaggctggagcaatgaatgctttggtcagggtctctgct 315
|| || ||| | |||||||| || ||||| ||||||||||| | ||||| || || |||
Sbjct: 1252 ccaggctttcaacaccacaagaaagctggtgcaatgaatgcacttgtcagagtttcagct 1193
Query: 316 gtgctcacaaatgctccttatctgttgaatttggattgtgatcactacttcaataatagt 375
|| || || |||| |||| ||| ||||| | ||||||||||||||| | || || ||
Sbjct: 1192 gttcttactaatggacctttcctgctgaatcttgattgtgatcactacataaacaacagc 1133
Query: 376 aaggctattagagaagcaatgtgtttcatgatggatcctttgcttggaaagagagtgtgc 435
|| ||| | || ||||| |||||||||||||||||||| |||||||| || ||
Sbjct: 1132 aaagctttgagggaagctatgtgtttcatgatggatcccaatcttggaaaacatgtctgt 1073
Query: 436 tatgtccagttcccacaaaggtttgatggcattgacaggcatgatcgatatgccaatcgg 495
||||| ||||| || || || |||||||| ||||| ||| |||||||||||||||||||
Sbjct: 1072 tatgttcagtttccccagagatttgatggtattgataggaatgatcgatatgccaatcgc 1013
Query: 496 aatattgtattctttgatataaacatgaaaggtttggatggcattcaaggacctatatat 555
|| | ||| ||||||||||||||| ||| ||||||||||| |||||||| ||| | |||
Sbjct: 1012 aacactgttttctttgatataaacttgaggggtttggatggtattcaaggccctgtttat 953
Query: 556 gttggcactggttgtgtgttca 577
|| || ||||| ||||| ||||
Sbjct: 952 gtgggtactggatgtgtcttca 931
>KJC_c02030
Length = 1305
Score = 101 bits (51), Expect = 3e-21
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 31 atgaagagagagtatgaagagtttaaagttcggattaatgcattggttgccaaggcacaa 90
||||||||||| |||||||| || |||||| | || |||| ||||||||||| ||||||
Sbjct: 110 atgaagagagaatatgaagaattcaaagttagaataaatggattggttgccactgcacaa 51
Query: 91 aaggtcccagaagaagggtggacaatgcaggatgggactccatggcc 137
|| || |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 50 aaagtaccagaagatggctggacaatgcaggatggaactccatggcc 4
>KJC_c12964
Length = 624
Score = 60.0 bits (30), Expect = 9e-09
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 436 tatgtccagttcccacaaaggtttgatggcattgacaggcatgatcgatatgccaatcgg 495
||||||||||| || || || |||||||| || ||||| |||||||||||||||| ||
Sbjct: 525 tatgtccagtttccccagagatttgatggtatcgacagaaatgatcgatatgccaaccgc 466
Query: 496 aatattgtattctttgatataaacatgaaaggtttggatggcattcaagg 545
|| | || |||||||||||||| | | ||| ||||||||||| |||||
Sbjct: 465 aacacagttttctttgatataaatttaagaggattggatggcatccaagg 416