Jatropha Genome Database

JcCB0578941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0578941.10 - phase: 1 /pseudo/partial
         (565 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01262                                                            287   1e-77

>KJC_c01262 
          Length = 901

 Score =  287 bits (145), Expect = 1e-77
 Identities = 152/153 (99%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                       
Query: 99  ctggatctcctgctcagctgaccatcttttattgctggcacagtgaatgtgtatgatgat 158
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 750 ctggatctcctgctcagctgaccatcttttat-gctggcacagtgaatgtgtatgatgat 808

                                                                       
Query: 159 atatcgcctgagaaggctcaggctatcttgttcttggctggaaatggctcttccatctcc 218
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 atatcgcctgagaaggctcaggctatcttgttcttggctggaaatggctcttccatctcc 868

                                            
Query: 219 tccaacatggcacagccaaaaattcaagtccag 251
           |||||||||||||||||||||||||||||||||
Sbjct: 869 tccaacatggcacagccaaaaattcaagtccag 901