Jatropha Genome Database

JcCB0575821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0575821.10 + phase: 0 /partial
         (555 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04504                                                           1084   0.0  

>KJC_c04504 
          Length = 751

 Score = 1084 bits (547), Expect = 0.0
 Identities = 554/555 (99%), Gaps = 1/555 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatctcagtaacggaaagggatccatgtcaacggccagctctagtgtagcttggaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atgaatctcagtaacggaaagggatccatgtcaacggccagctctagtgtagcttggaaa 197

                                                                       
Query: 61  gctggggatgttgtttccgatcagtttccgataggcctgcgagtattggttgttgatgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gctggggatgttgtttccgatcagtttccgataggcctgcgagtattggttgttgatgat 257

                                                                       
Query: 121 gatccaacatgtctcatgatcttggagaagatgcttaaaacttgcctttataaagttact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gatccaacatgtctcatgatcttggagaagatgcttaaaacttgcctttataaagttact 317

                                                                       
Query: 181 aaatgcactcgagcagagcaagcattgtccatgctccgagagaacaaaaatgggtatgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaatgcactcgagcagagcaagcattgtccatgctccgagagaacaaaaatgggtatgat 377

                                                                       
Query: 241 attgttataagtgatgttcacatgccagacatggatggatttaaactccttgaatacatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 attgttataagtgatgttcacatgccagacatggatggatttaaactccttgaatacatt 437

                                                                       
Query: 301 ggtctggagatggatctgcctgttatcatgatgtcagcagatgatgggaaaaatgttgtt 360
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 438 ggtctggagatggatctgcctgttatcatgatgtcagcagatgatggg-aaaatgttgtt 496

                                                                       
Query: 361 atgaagggggtcacccatggtgcttgtgattacttgattaagccagttcgcatagaggcg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atgaagggggtcacccatggtgcttgtgattacttgattaagccagttcgcatagaggcg 556

                                                                       
Query: 421 ctgaaaaacatatggcagcacgtggttcggaagaaaaagaatgaaatgaaggacttggag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctgaaaaacatatggcagcacgtggttcggaagaaaaagaatgaaatgaaggacttggag 616

                                                                       
Query: 481 caatcaggaagcgtagaagaaggagatcggcagcagagacagtctgaggatgcagattat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 caatcaggaagcgtagaagaaggagatcggcagcagagacagtctgaggatgcagattat 676

                          
Query: 541 tcttcttcagtcaat 555
           |||||||||||||||
Sbjct: 677 tcttcttcagtcaat 691