Jatropha Genome Database
- JcCB0569561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0569561.10 + phase: 2 /partial
(226 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00598 448 e-126
KJC_c04821 216 2e-56
KJC_c02807 101 7e-22
KJC_s18796 72 6e-13
KJC_c04815 58 9e-09
KJC_c02206 52 6e-07
>KJC_c00598
Length = 889
Score = 448 bits (226), Expect = e-126
Identities = 226/226 (100%)
Strand = Plus / Minus
Query: 1 tggatcacaaggaatgaaagacttcatgaatgagagcaaattgattgaccttttgaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tggatcacaaggaatgaaagacttcatgaatgagagcaaattgattgaccttttgaatgg 200
Query: 61 ttctgagtatgtaccaacttatgaagacaaagatggagactggatgcttgtaggagatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttctgagtatgtaccaacttatgaagacaaagatggagactggatgcttgtaggagatgt 140
Query: 121 gccttgggaaatgtttatcgattcatgcaaacgattaagaataatgaaaggctctgaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gccttgggaaatgtttatcgattcatgcaaacgattaagaataatgaaaggctctgaagc 80
Query: 181 gatcggacttgcccctagagctgtggagaagtgcaagaacaggagt 226
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gatcggacttgcccctagagctgtggagaagtgcaagaacaggagt 34
>KJC_c04821
Length = 403
Score = 216 bits (109), Expect = 2e-56
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 118 tgtgccttgggaaatgtttatcgattcatgcaaacgattaagaataatgaaaggctctga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgtgccttgggaaatgtttatcgattcatgcaaacgattaagaataatgaaaggctctga 333
Query: 178 agcgatcggacttgcccctagagctgtggagaagtgcaagaacaggagt 226
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agcgatcggacttgcccctagagctgtggagaagtgcaagaacaggagt 284
>KJC_c02807
Length = 794
Score = 101 bits (51), Expect = 7e-22
Identities = 171/211 (81%)
Strand = Plus / Plus
Query: 8 caaggaatgaaagacttcatgaatgagagcaaattgattgaccttttgaatggttctgag 67
|||||||||| |||||| |||||||| ||||| ||||| || || | || | |||||
Sbjct: 382 caaggaatgatagactttatgaatgaaagcaagttgatggatctcctcaacagctctgaa 441
Query: 68 tatgtaccaacttatgaagacaaagatggagactggatgcttgtaggagatgtgccttgg 127
||||| ||||| |||||||| || ||||| ||||||||||| || || ||||| || |||
Sbjct: 442 tatgtgccaacctatgaagataaggatggtgactggatgctcgtgggcgatgttccatgg 501
Query: 128 gaaatgtttatcgattcatgcaaacgattaagaataatgaaaggctctgaagcgatcgga 187
|| |||||| | ||||||||||| || || | || |||||||| |||||||| || ||
Sbjct: 502 gagatgtttgttgattcatgcaagcgcttgcgcattatgaaaggatctgaagctattggt 561
Query: 188 cttgcccctagagctgtggagaagtgcaaga 218
||||| || |||||| ||||||| |||||||
Sbjct: 562 cttgcaccaagagctatggagaaatgcaaga 592
>KJC_s18796
Length = 467
Score = 71.9 bits (36), Expect = 6e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 tggatcacaaggaatgaaagacttcatgaatgagag 36
||||||||||||||||||||||||||||||||||||
Sbjct: 432 tggatcacaaggaatgaaagacttcatgaatgagag 467
>KJC_c04815
Length = 845
Score = 58.0 bits (29), Expect = 9e-09
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 54 tgaatggttctgagtatgtaccaacttatgaagacaaagatggagactggatgcttgtag 113
||||||| || |||||||| | ||| || || || || ||||| || ||||||||||| |
Sbjct: 637 tgaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatgcttgttg 696
Query: 114 gagatgtgccttgggaaatgtttatcgattcatgcaa 150
| |||||||| ||||| |||||||| ||| |||||||
Sbjct: 697 gggatgtgccatgggagatgtttattgatacatgcaa 733
>KJC_c02206
Length = 817
Score = 52.0 bits (26), Expect = 6e-07
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 80 tatgaagacaaagatggagactggatgcttgtaggagatgtgccttgggaaatgttta 137
|||||||| || || || |||||||||||||| || |||||||| ||||| |||||||
Sbjct: 394 tatgaagataaggacggtgactggatgcttgtcggcgatgtgccctgggagatgttta 337