Jatropha Genome Database

JcCB0569231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0569231.10 - phase: 0 /partial/short
         (126 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00388                                                            222   1e-58

>KJC_c00388 
          Length = 1622

 Score =  222 bits (112), Expect = 1e-58
 Identities = 123/126 (97%), Gaps = 3/126 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgtcttgttctatgcctgttcactagatcctgaaaactgtggcttgaaatttgccaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tttgtcttgttctatgcctgttcactagatcctgaaaactgtggcttgaaatttgccaga 490

                                                                       
Query: 61  acgcttgcggataggtttgtttacggtgacaacccacttaccagcaggatgagttctgtg 120
           |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 489 acgcttgcggataggtttgtttacggtgacaacccacttac---caggatgagttctgtg 433

                 
Query: 121 gcttat 126
           ||||||
Sbjct: 432 gcttat 427