Jatropha Genome Database
- JcCB0550991.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0550991.10 - phase: 0 /partial
(549 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01262 1043 0.0
KJC_s18540 222 7e-58
>KJC_c01262
Length = 901
Score = 1043 bits (526), Expect = 0.0
Identities = 545/549 (99%), Gaps = 3/549 (0%)
Strand = Plus / Plus
Query: 1 atggagagagattttttgggtttgaattcgaaagaaccactagctgttgttaaggaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atggagagagattttttgggtttgaattcgaaagaaccactagctgttgttaaggaagag 217
Query: 61 gttaactctgatgcgtacaaagagataggatttagtaaaggttcaggtatacactggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gttaactctgatgcgtacaaagagataggatttagtaaaggttcaggtatacactggccc 277
Query: 121 ttctccaacaaggtgtctgctcttcctcatttgaattctttcaaggttgctttagaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttctccaacaaggtgtctgctcttcctcatttgaattctttcaaggttgctttagaagac 337
Query: 181 aagactaaaaggattgtatctgactccttagcgtcccccggattcttgtccatctcaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aagactaaaaggattgtatctgactccttagcgtcccccggattcttgtccatctcaact 397
Query: 241 gcagatgcatctgaccctagccaaagacagtttatgcctgaaatccagaaatcattcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gcagatgcatctgaccctagccaaagacagtttatgcctgaaatccagaaatcattcaat 457
Query: 301 catgacaggcaaggtgggagtcattttacattgactgcttatcctgcgcaacatgaggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 catgacaggcaaggtgggagtcattttacattgactgcttatcctgcgcaacatgaggtg 517
Query: 361 cattctgttcatcatcctctcgatgtgaagatgtttccagtgtccaaccatggaagtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cattctgttcatcatcctctcgatgtgaagatgtttccagtgtccaaccatggaagtttg 577
Query: 421 atttctatggcgaaacccttttcttcaaaaaattattatgcaacttccagtcagaatatg 480
|||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 578 atttctatggcgaa--ccctttcttc-aaaaattattatgcaacttccagtcagaatatg 634
Query: 481 gttggtaataccacaaagccacaattacttggaggaattcctgtcacaaccccacaaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gttggtaataccacaaagccacaattacttggaggaattcctgtcacaaccccacaaaca 694
Query: 541 attattcca 549
|||||||||
Sbjct: 695 attattcca 703
>KJC_s18540
Length = 400
Score = 222 bits (112), Expect = 7e-58
Identities = 133/138 (96%), Gaps = 4/138 (2%)
Strand = Plus / Minus
Query: 360 gcattctgttcatcatcctctcgatgtgaagatgtttccagtgtccaaccatggaagttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gcattctgttcatcatcctctcgatgtgaagatgtttccagtgtccaaccatggaagttt 75
Query: 420 gatttctatggcgaaacccttttcttcaaaaaattattatgcaacttccagtcagaatat 479
||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||
Sbjct: 74 gatttctatggcgaa--ccctttcttc--aaaattattatgcaacttccagtcagaatat 19
Query: 480 ggttggtaataccacaaa 497
||||||||||||||||||
Sbjct: 18 ggttggtaataccacaaa 1