Jatropha Genome Database

JcCB0549901.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0549901.10 + phase: 1 /partial
         (500 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05513                                                            115   1e-25

>KJC_c05513 
          Length = 596

 Score =  115 bits (58), Expect = 1e-25
 Identities = 87/94 (92%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                      
Query: 1  ttgtcacatatggtacgttgatcaaaggttacgcgaagataaaaga-tcttgaaaatatg 59
          |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 94 ttgtcacatatggtacgttgatcaaaggttacgcgaagataaaagagtcttgaaaatatg 35

                                            
Query: 60 atgaaaaaatat-gaagaaatgcaattaagtggt 92
          ||  |||||||| ||||||  | |||||||||||
Sbjct: 34 atagaaaaatatagaagaatagtaattaagtggt 1