Jatropha Genome Database
- JcCB0548251.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0548251.10 + phase: 1 /pseudo/partial
(688 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00992 987 0.0
KJC_c00785 753 0.0
>KJC_c00992
Length = 1452
Score = 987 bits (498), Expect = 0.0
Identities = 524/530 (98%), Gaps = 2/530 (0%)
Strand = Plus / Plus
Query: 160 agctgcggcctgatgtcttctcaagcctatctggagctttttctgggtgcaaggaattga 219
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctgcggcctgatgtct-ctcaagcctatctggagctttttctgggtgcaaggaattga 59
Query: 220 aaagtttatctggattttgggatgtggttccaggttaccttccagcaatttatcctattt 279
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aaggtttatctggattttgggatgtggttccaggttaccttccagcaatttatcctattt 119
Query: 280 gctctggcctaacatcgttgaacttgagctatgctactatccaaagccctgatgtcatta 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gctctggcctaacatcgttgaacttgagctatgctactatccaaagccctgatgtcatta 179
Query: 340 aacttgtcagtcaatgtcagagtttgcagcggttgtgggtgctggattacatcgaagata 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aacttgtcagtcaatgtcagagtttgcagcggttgtgggtgctggattacatcgaagata 239
Query: 400 ttggacttgaagctcttgcaacattttgcaaggacctgcgagaattgagggttttcccat 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttggacttgaagctcttgcaacattttgcaaggacctgcgagaattgagggttttcccat 299
Query: 460 ctgagccatttgctgtggaaccaaatgtatccttgacagagcagggccttgtctctgttt 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctgagccatttgctgtggaaccaaatgtatccttgacagagcagggccttgtctctgttt 359
Query: 520 ctgagggttgccctaaactccaatctgttctgtacttttgccatcaaatgaccaatgatg 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgagggttgccctaaactccaatctgttctgtacttttgccatcaaatgaccaatgatg 419
Query: 580 ccttgataacagttgctaggaatcgtcccaacatgactcgctttcggctttgtattatgg 639
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 420 ccttgataacagttgctaggaatcgtccaaacatgactcgctttcggctttgtattatgg 479
Query: 640 aaccacgtacccctga-tacaccacccttcagccactaaatgatggtttt 688
|||||||||||||||| ||||| ||||||||||||||| |||||||||||
Sbjct: 480 aaccacgtacccctgattacacaacccttcagccactagatgatggtttt 529
>KJC_c00785
Length = 1357
Score = 753 bits (380), Expect = 0.0
Identities = 380/380 (100%)
Strand = Plus / Plus
Query: 1 tttctgaggtgagtttctcggccttggagcgtctggtgggtcggtgccccaatctgagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 tttctgaggtgagtttctcggccttggagcgtctggtgggtcggtgccccaatctgagga 838
Query: 61 ctcttcggctcaaccgtaccgtgcctcttgacaggcttgcaaacatactttctagggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 ctcttcggctcaaccgtaccgtgcctcttgacaggcttgcaaacatactttctagggcac 898
Query: 121 cccagctagttgagttgggcacaggaacctactcatctgagctgcggcctgatgtcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 cccagctagttgagttgggcacaggaacctactcatctgagctgcggcctgatgtcttct 958
Query: 181 caagcctatctggagctttttctgggtgcaaggaattgaaaagtttatctggattttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 caagcctatctggagctttttctgggtgcaaggaattgaaaagtttatctggattttggg 1018
Query: 241 atgtggttccaggttaccttccagcaatttatcctatttgctctggcctaacatcgttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 atgtggttccaggttaccttccagcaatttatcctatttgctctggcctaacatcgttga 1078
Query: 301 acttgagctatgctactatccaaagccctgatgtcattaaacttgtcagtcaatgtcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 acttgagctatgctactatccaaagccctgatgtcattaaacttgtcagtcaatgtcaga 1138
Query: 361 gtttgcagcggttgtgggtg 380
||||||||||||||||||||
Sbjct: 1139 gtttgcagcggttgtgggtg 1158