Jatropha Genome Database

JcCB0545911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0545911.10 - phase: 0 /partial
         (306 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10831                                                            105   6e-23

>KJC_c10831 
          Length = 433

 Score =  105 bits (53), Expect = 6e-23
 Identities = 60/61 (98%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                       
Query: 243 taactacgatattgtcaaggacgagcccttggaaggacggtacgagtgggtgcgattaaa 302
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 433 taactacgatattgtcaaggacgagcc-ttggaaggacggtacgagtgggtgcgattaaa 375

            
Query: 303 g 303
           |
Sbjct: 374 g 374