Jatropha Genome Database

JcCB0545221.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0545221.10 + phase: 1 /partial
         (875 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01856                                                            890   0.0  

>KJC_c01856 
          Length = 933

 Score =  890 bits (449), Expect = 0.0
 Identities = 449/449 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   attatcccgagaaaccaaaccataagatggaatgttctgcagagaatgcaattgggaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 attatcccgagaaaccaaaccataagatggaatgttctgcagagaatgcaattgggaaga 390

                                                                       
Query: 61  catcattttcttctgcgaaaaatggtagtcaaccttctaataatggttcttatttaggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 catcattttcttctgcgaaaaatggtagtcaaccttctaataatggttcttatttaggga 330

                                                                       
Query: 121 atcccccacctgttcctgtacctactgattccaaaatgagtccttggtgtttccaacatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atcccccacctgttcctgtacctactgattccaaaatgagtccttggtgtttccaacatt 270

                                                                       
Query: 181 cacttggacatcagtggctagttcctgtaatgtcgccttcagaaggacttgtatacaagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cacttggacatcagtggctagttcctgtaatgtcgccttcagaaggacttgtatacaagc 210

                                                                       
Query: 241 catacaatgcaccaggattcttgggatcagcctgtggaggatgcggaccttttggcgcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 catacaatgcaccaggattcttgggatcagcctgtggaggatgcggaccttttggcgcat 150

                                                                       
Query: 301 ctcccatggtcggtaactttattaatccaacctatgggattccaccttcttctcatcacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ctcccatggtcggtaactttattaatccaacctatgggattccaccttcttctcatcacc 90

                                                                       
Query: 361 atcaaggaactggcttcatacctggtgttcatggttatttccctccatatggcatgccag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  atcaaggaactggcttcatacctggtgttcatggttatttccctccatatggcatgccag 30

                                        
Query: 421 ttatgcatccagccatgtcaggttcagca 449
           |||||||||||||||||||||||||||||
Sbjct: 29  ttatgcatccagccatgtcaggttcagca 1