Jatropha Genome Database

JcCB0543811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0543811.10 + phase: 0 /partial
         (444 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04995                                                            737   0.0  

>KJC_c04995 
          Length = 658

 Score =  737 bits (372), Expect = 0.0
 Identities = 381/384 (99%)
 Strand = Plus / Minus

                                                                       
Query: 45  ggtggggggcgtaacaccaaagaagggaggaacagaacacttgggcctccctgtttttaa 104
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 579 ggtggggggcgtaacaccaaagaagggaggaacagaacacttgggcctccctgttttcaa 520

                                                                       
Query: 105 tacagttgcagaagcaaaggctgaaacaaaagctaatgcttcagtcatttatgttccccc 164
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 519 cacagttgcagaagcaaaggctgaaacaaaagctaatgcttcagtcatctatgttccccc 460

                                                                       
Query: 165 accatttgcagcagcagcaattatggaggcaatggaagcggagttagatcttgttgtgtg 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 accatttgcagcagcagcaattatggaggcaatggaagcggagttagatcttgttgtgtg 400

                                                                       
Query: 225 cattacagagggaattcctcaacatgatatggtacgtgtgaaggctgctcttaataaaca 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cattacagagggaattcctcaacatgatatggtacgtgtgaaggctgctcttaataaaca 340

                                                                       
Query: 285 gtccaaaactcggttgattggtccaaactgccctggtatcattaaacctggggaatgtaa 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtccaaaactcggttgattggtccaaactgccctggtatcattaaacctggggaatgtaa 280

                                                                       
Query: 345 gattggcataatgcctgggtacatacataaacctggtcgcattggaatagtttctcgatc 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gattggcataatgcctgggtacatacataaacctggtcgcattggaatagtttctcgatc 220

                                   
Query: 405 tggtactttgacctatgaagcggt 428
           ||||||||||||||||||||||||
Sbjct: 219 tggtactttgacctatgaagcggt 196