Jatropha Genome Database

JcCB0542951.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0542951.10 - phase: 2 /pseudo/partial
         (1375 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04568                                                             72   4e-12

>KJC_c04568 
          Length = 884

 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 764 agtgagacatcatcaacaacagtggagtgggcaatgtctgaaatgctgaaaaatccaaga 823
           ||||||||||||||||||||||| || ||||| ||||| ||||||||||  |||||||||
Sbjct: 108 agtgagacatcatcaacaacagtagaatgggcgatgtccgaaatgctgaggaatccaaga 49