Jatropha Genome Database
- JcCB0538041.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0538041.10 + phase: 0
(1308 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07362 866 0.0
KJC_c11473 262 2e-69
KJC_c06964 220 7e-57
KJC_c00187 76 2e-13
>KJC_c07362
Length = 492
Score = 866 bits (437), Expect = 0.0
Identities = 488/496 (98%), Gaps = 8/496 (1%)
Strand = Plus / Minus
Query: 144 tttcttttatcgatctccttcttcatctaccaatcctc-tgccgtccgatccatcccgtc 202
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 491 tttcttttatcgatctccttcttcatctaccaatcctcctgccgtccgatccatcccgtc 432
Query: 203 gctctcttcggacctcttggggtggctccgactgggaaaaacgggtgcggtcgtccgcca 262
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gctctcttcggacctct--gggtggctccgactgggaaaaacgggtgcggtcgtccgcca 374
Query: 263 gaattcgttctcgaaatggattttctgtactggtcactggcgcagctgggtttgttggga 322
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 373 gaattcgt-ctcgaa-tggattttctgtactggtcactggcgcagctgggtttgt-ggga 317
Query: 323 cccacgtctctgcagctttgaaacgccggggcgatggggttctggggcttgacaatttca 382
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 316 cccacgtctctgcagctttgaaacgccggggcgatggg-ttctggggcttgacaatttca 258
Query: 383 acgattattatgatccatctttgaaacgagctcgccaagcgcttcttgaacgctccggag 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acgattattatgatccatctttgaaacgagctcgccaagcgcttcttgaacgctccggag 198
Query: 443 ttttcattgttgaaggagacataaacgatgtcgctttattgaagaagctctttgaagtgg 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttttcattgttgaaggagacataaacgatgtcgctttattgaagaagctctttgaagtgg 138
Query: 503 tgccttttactcatgtgatgcatttggctgctcaggct-ggggttaggtatgcaatggaa 561
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 137 tgccttttactcatgtgatgcatttggctgctcaggctgggggttaggtatgcaatggaa 78
Query: 562 aaccctagctcttatgtgcacagtaacattgctggtcttgttagtttattagaagtttgt 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aaccctagctcttatgtgcacagtaacattgctggtcttgttagtttattagaagtttgt 18
Query: 622 aaagaagcaaatcccc 637
||||||||||||||||
Sbjct: 17 aaagaagcaaatcccc 2
>KJC_c11473
Length = 429
Score = 262 bits (132), Expect = 2e-69
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 1 atgtctcatcttgaccacattccgtcaacgcctggcaaattcaagatggacaaatcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atgtctcatcttgaccacattccgtcaacgcctggcaaattcaagatggacaaatcttca 357
Query: 61 tacccatatagccgggtcaggtggcattcatctttagctaaactcacattctggtcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tacccatatagccgggtcaggtggcattcatctttagctaaactcacattctggtcttta 417
Query: 121 gtctttgttggt 132
||||||||||||
Sbjct: 418 gtctttgttggt 429
>KJC_c06964
Length = 561
Score = 220 bits (111), Expect = 7e-57
Identities = 300/363 (82%)
Strand = Plus / Plus
Query: 507 ttttactcatgtgatgcatttggctgctcaggctggggttaggtatgcaatggaaaaccc 566
|||||| ||||| |||||||| |||||||| |||||||| | ||||||||| | || ||
Sbjct: 105 ttttacccatgttatgcatttagctgctcaagctggggtgcgttatgcaatgcagaatcc 164
Query: 567 tagctcttatgtgcacagtaacattgctggtcttgttagtttattagaagtttgtaaaga 626
| |||||||| || ||||| |||| ||| |||| | ||| | ||||| ||||||
Sbjct: 165 aaaatcttatgttcatagtaatattggtgggtttgtcaatttgcttgaagtatgtaaatc 224
Query: 627 agcaaatccccaacctgcaattgtatgggcatcttccagttctgtttatgggcttaatac 686
||| || || ||||||| | |||| ||||| ||||| ||||| ||||||||||||||| |
Sbjct: 225 agctaacccacaacctgtagttgtttgggcgtcttctagttcagtttatgggcttaattc 284
Query: 687 aaaagtacccttttctgagaaagatagaactgaccaacctgctagtttgtatgctgctac 746
|||||||||||||| ||||||||||| ||||| || ||||| ||||| ||||| || ||
Sbjct: 285 gaaagtacccttttcagagaaagataggactgatcagcctgcgagtttatatgcagcaac 344
Query: 747 taaaaaggctggagaggaaattgcacatacttataatcatatttacggtctttcccttac 806
||| || || |||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 345 taagaaagcaggagaggaaattgctcatacttataatcatatttatggtctttcaattac 404
Query: 807 tggcttgcgctttttcacagtttatggaccatggggtagaccagatatggcttatttctt 866
||| || | || || || |||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 405 tgggttaaggttctttactgtttatggtccatggggcagacctgatatggcttatttctt 464
Query: 867 ttt 869
|||
Sbjct: 465 ttt 467
>KJC_c00187
Length = 1301
Score = 75.8 bits (38), Expect = 2e-13
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 748 aaaaaggctggagaggaaattgcacatacttataatcatatttacggtctttcccttact 807
|||||||| || ||||||||| | || |||||||| || |||||||||||||| |||||
Sbjct: 551 aaaaaggcaggtgaggaaattacccacacttataaccacatttacggtctttcaattact 492
Query: 808 ggcttgcgctttttcacagtttatggaccatggggtagaccagatatggcttatttct 865
|| ||| | ||||| || || || || |||||||| ||||| |||||||| |||||||
Sbjct: 491 gggttgagattttttaccgtgtacggtccatggggaagacccgatatggcgtatttct 434
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 487 aagctctttgaagtggtgccttttactcatgtgatgcatttggctgctca 536
||||| ||||| |||||| ||||||||||||||||||| ||||| |||||
Sbjct: 812 aagctgtttgatgtggtggcttttactcatgtgatgcacttggcggctca 763