Jatropha Genome Database

JcCB0537911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0537911.10 + phase: 0 /partial
         (498 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02492                                                            971   0.0  

>KJC_c02492 
          Length = 956

 Score =  971 bits (490), Expect = 0.0
 Identities = 497/498 (99%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttgcaattgagactgcatcatttagcaagtatgctgggtttactggagtccgtctggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gttgcaattgagactgcatcatttagcaagtatgctgggtttactggagtccgtctggga 369

                                                                       
Query: 61  tggactgtggttccaaaagagcttctcttttcagatggcttccctgttgccaaggacttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tggactgtggttccaaaagagcttctcttttcagatggcttccctgttgccaaggacttc 429

                                                                       
Query: 121 aaccgtattgtttgtacttgctttaacggtgcatccaatgttgtccaagctggtggtctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaccgtattgtttgtacttgctttaacggtgcatccaatgttgtccaagctggtggtctg 489

                                                                       
Query: 181 gcttgcctttctccagaaggccgcaatgcgatgcaaaaggtggttggattctataaagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gcttgcctttctccagaaggccgcaatgcgatgcaaaaggtggttggattctataaagaa 549

                                                                       
Query: 241 aatgctgatattataatggatacatttaattcgcttggttttaatgtgtacggtggggtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aatgctgatattataatggatacatttaattcgcttggttttaatgtgtacggtggggtg 609

                                                                       
Query: 301 aatgcaccatatgtgtgggtccacttccctggccggagttcatgggatgtcttcagtgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aatgcaccatatgtgtgggtccacttccctggccggagttcatgggatgtcttcagtgag 669

                                                                       
Query: 361 attctagagaagactcatgtggttaccacacctggcagcggattcggacctggtggtgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 attctagagaagactcatgtggttaccacacctggcagcggattcggacctggtggtgaa 729

                                                                       
Query: 421 ggttttatcagggttagtgcttttggtcacagggaaaatattttagaagcctgcagaagg 480
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 730 ggttttatcagggttagtgcttttggtcacaggg-aaatattttagaagcctgcagaagg 788

                             
Query: 481 ttcaagcagctttacaag 498
           ||||||||||||||||||
Sbjct: 789 ttcaagcagctttacaag 806