Jatropha Genome Database

JcCB0534201.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0534201.10 - phase: 2 /partial
         (301 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01718                                                            365   e-101

>KJC_c01718 
          Length = 1336

 Score =  365 bits (184), Expect = e-101
 Identities = 184/184 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 125

                                                                       
Query: 61  gagcagtactgttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gagcagtactgttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaact 65

                                                                       
Query: 121 agcttgccaaggaagtattgctcatgtggtggtgatgcccaatgtcactattgagaagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  agcttgccaaggaagtattgctcatgtggtggtgatgcccaatgtcactattgagaagct 5

               
Query: 181 ggat 184
           ||||
Sbjct: 4   ggat 1