Jatropha Genome Database
- JcCB0498951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0498951.10 + phase: 0 /pseudo/partial
(709 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04782 775 0.0
>KJC_c04782
Length = 794
Score = 775 bits (391), Expect = 0.0
Identities = 430/442 (97%), Gaps = 12/442 (2%)
Strand = Plus / Minus
Query: 269 gatggaaaggcaacatatgttcgtcgctatgtggagacatcacgacttaagcaagaagag 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gatggaaaggcaacatatgttcgtcgctatgtggagacatcacgacttaagcaagaagag 409
Query: 329 ttttttggaggcgccaaatttatgaagataggtgatctcaaagggttctttggattattg 388
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttttt-ggaggcgccaaatttatgaagataggtgatctcaaagggttctttggattattg 350
Query: 389 acagtttacatgcaaatgctgagagcgaaattgaaagtgctggacatgtcatatggatat 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 acagtttacatgcaaatgctgagagcgaaattgaaagtgctggacatgtcatatggatat 290
Query: 449 gggacggccttgttcagctaatacagctctcatttatcaccatagaaagctcctagcact 508
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gggacggc----------taatacagctctcatttatcaccatagaaagctcctagcact 240
Query: 509 ttcagaggcagataaaccctatgtagttaaagttatggaagatggagatttacaaactgt 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttcagaggcagataaaccctatgtagttaaagttatggaagatggagatttacaaactgt 180
Query: 569 tggcttgctggattatgacaagagacttaagcactccttcactgctcatccaaaggttga 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tggcttgctggattatgacaagagacttaagcactccttcactgctcatccaaaggttga 120
Query: 629 tccattcactggagagatgtttacatttggttatgctcatgaacccccatacgtcactta 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tccattcactggagagatgtttacatttggttatgctcatgaacccccatacgtcactta 60
Query: 689 cagag-tatttcaaaggatggt 709
||||| ||||||||||||||||
Sbjct: 59 cagagttatttcaaaggatggt 38
Score = 533 bits (269), Expect = e-151
Identities = 269/269 (100%)
Strand = Plus / Minus
Query: 1 aatgatggaccggcgatagtggaggtgaatccaaagccgaacaaaggactgacttcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aatgatggaccggcgatagtggaggtgaatccaaagccgaacaaaggactgacttcaaag 718
Query: 61 cttgttgactacttggagaagctgatcgtcaaattaatgtttgataaatcccagcctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cttgttgactacttggagaagctgatcgtcaaattaatgtttgataaatcccagcctctc 658
Query: 121 cattatctcaacggtaacttcgctcctgttcccgaagctcctccggttaaagaccttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cattatctcaacggtaacttcgctcctgttcccgaagctcctccggttaaagaccttcct 598
Query: 181 gtcataggccaccttcctgaatgcttgaatggggagtttgtgagggtaggtcctaatcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtcataggccaccttcctgaatgcttgaatggggagtttgtgagggtaggtcctaatcca 538
Query: 241 aagtttgctcctgtggctggatatcattg 269
|||||||||||||||||||||||||||||
Sbjct: 537 aagtttgctcctgtggctggatatcattg 509