Jatropha Genome Database
- JcCB0498421.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0498421.10 - phase: 0 /partial
(288 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00035 571 e-163
KJC_c10941 285 3e-77
KJC_s14505 244 1e-64
KJC_c07464 92 9e-19
KJC_c01447 92 9e-19
KJC_c01445 88 1e-17
>KJC_c00035
Length = 958
Score = 571 bits (288), Expect = e-163
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 1 atggccaaggaagtaagtgaagaaacgcaaactacccatgcaaaggattatgttgatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggccaaggaagtaagtgaagaaacgcaaactacccatgcaaaggattatgttgatcca 140
Query: 61 ccacctgcgccactgatcgacatggctgaaatcaagctctggtctttctacagagcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ccacctgcgccactgatcgacatggctgaaatcaagctctggtctttctacagagcttta 200
Query: 121 atagctgagttcatagccactctccttttcctttacataactgtagccactgtaattggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagctgagttcatagccactctccttttcctttacataactgtagccactgtaattggc 260
Query: 181 tacaagaaacaaactgatccatgtggtggagttggtcttttgggcattgcatgggccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaagaaacaaactgatccatgtggtggagttggtcttttgggcattgcatgggccttt 320
Query: 241 ggtggcatgatctttatccttgtttactgcactgccggtatatctggt 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtggcatgatctttatccttgtttactgcactgccggtatatctggt 368
>KJC_c10941
Length = 854
Score = 285 bits (144), Expect = 3e-77
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 145 cttttcctttacataactgtagccactgtaattggctacaagaaacaaactgatccatgt 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cttttcctttacataactgtagccactgtaattggctacaagaaacaaactgatccatgt 192
Query: 205 ggtggagttggtcttttgggcattgcatgggcctttggtggcatgatctttatccttgtt 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggtggagttggtcttttgggcattgcatgggcctttggtggcatgatctttatccttgtt 252
Query: 265 tactgcactgccggtatatctggt 288
||||||||||||||||||||||||
Sbjct: 253 tactgcactgccggtatatctggt 276
>KJC_s14505
Length = 342
Score = 244 bits (123), Expect = 1e-64
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 166 gccactgtaattggctacaagaaacaaactgatccatgtggtggagttggtcttttgggc 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccactgtaattggctacaagaaacaaactgatccatgtggtggagttggtcttttgggc 60
Query: 226 attgcatgggcctttggtggcatgatctttatccttgtttactgcactgccggtatatct 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgcatgggcctttggtggcatgatctttatccttgtttactgcactgccggtatatct 120
Query: 286 ggt 288
|||
Sbjct: 121 ggt 123
>KJC_c07464
Length = 503
Score = 91.7 bits (46), Expect = 9e-19
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 202 tgtggtggagttggtcttttgggcattgcatgggcctttggtggcatgatctttatcctt 261
|||||||| |||||| || | || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 51 tgtggtggtgttggtattcttggtattgcttgggcttttggtggcatgatctttattctt 110
Query: 262 gtttactgcactgccggtatatctgg 287
|||||||||||||| ||||| |||||
Sbjct: 111 gtttactgcactgctggtatctctgg 136
>KJC_c01447
Length = 907
Score = 91.7 bits (46), Expect = 9e-19
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 202 tgtggtggagttggtcttttgggcattgcatgggcctttggtggcatgatctttatcctt 261
|||||||| |||||| || | || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 757 tgtggtggtgttggtattcttggtattgcttgggcttttggtggcatgatctttattctt 698
Query: 262 gtttactgcactgccggtatatctgg 287
|||||||||||||| ||||| |||||
Sbjct: 697 gtttactgcactgctggtatctctgg 672
>KJC_c01445
Length = 814
Score = 87.7 bits (44), Expect = 1e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 202 tgtggtggagttggtcttttgggcattgcatgggcctttggtggcatgatctttatcctt 261
|||||||| |||||| || | ||||| || ||||| |||||||||||||||||||| |||
Sbjct: 144 tgtggtggggttggtattctcggcatcgcttgggcttttggtggcatgatctttattctt 203
Query: 262 gtttactgcactgccggtat 281
|||||||||||||| |||||
Sbjct: 204 gtttactgcactgctggtat 223
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 100 tggtctttctacagagctttaatagctgagttcatagccactctccttttcctttacata 159
||||| || ||||||||| | || ||||| || ||||| ||||| |||||||||||||||
Sbjct: 24 tggtcattttacagagctctgattgctgaatttatagcaactctgcttttcctttacata 83
Query: 160 actgt 164
|||||
Sbjct: 84 actgt 88