Jatropha Genome Database

JcCB0495181.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0495181.10 - phase: 0 
         (573 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00179                                                           1019   0.0  

>KJC_c00179 
          Length = 2295

 Score = 1019 bits (514), Expect = 0.0
 Identities = 514/514 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggcttctacttcatctctaactctatcacaggcccttttggctcgggccgtctcttac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2260 atggcttctacttcatctctaactctatcacaggcccttttggctcgggccgtctcttac 2201

                                                                        
Query: 61   tatggctcttctcagtcctccgaccaccaccgcctctctctttctacaccttcccttcct 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2200 tatggctcttctcagtcctccgaccaccaccgcctctctctttctacaccttcccttcct 2141

                                                                        
Query: 121  gccttttctggtctcaagtctacctcttcctcaatcccacgcgctactgcctcccgccgc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2140 gccttttctggtctcaagtctacctcttcctcaatcccacgcgctactgcctcccgccgc 2081

                                                                        
Query: 181  agtagccgccgcagcatttccaaccgccagcaaacccaaatccgggcgtctgtggttgaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2080 agtagccgccgcagcatttccaaccgccagcaaacccaaatccgggcgtctgtggttgaa 2021

                                                                        
Query: 241  accgttgacgctaccactgagacttcattggttgagaaatctgtcaatacaattagattt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2020 accgttgacgctaccactgagacttcattggttgagaaatctgtcaatacaattagattt 1961

                                                                        
Query: 301  cttgctattgatgctgtggagaaggccaattcgggtcaccccggtttgcctatgggatgt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1960 cttgctattgatgctgtggagaaggccaattcgggtcaccccggtttgcctatgggatgt 1901

                                                                        
Query: 361  gctcctatgggtcatattttgtacgatgaagtaatgaaatataacccaaagaatccttat 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1900 gctcctatgggtcatattttgtacgatgaagtaatgaaatataacccaaagaatccttat 1841

                                                                        
Query: 421  tggttcaatcgcgatcggttcgtcttgtctgccggtcacggctgtatgttacagtatgct 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1840 tggttcaatcgcgatcggttcgtcttgtctgccggtcacggctgtatgttacagtatgct 1781

                                              
Query: 481  ttgcttcacctcgctggttatgatagtgtcaagg 514
            ||||||||||||||||||||||||||||||||||
Sbjct: 1780 ttgcttcacctcgctggttatgatagtgtcaagg 1747