Jatropha Genome Database
- JcCB0492351.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0492351.10 + phase: 1 /pseudo/partial
(716 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01718 1405 0.0
KJC_s15393 107 4e-23
>KJC_c01718
Length = 1336
Score = 1405 bits (709), Expect = 0.0
Identities = 716/717 (99%), Gaps = 1/717 (0%)
Strand = Plus / Minus
Query: 1 attggtttgcccgtctgtgggagatagagaaagatcaatactggggttacataaccaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 attggtttgcccgtctgtgggagatagagaaagatcaatactggggttacataaccaact 816
Query: 61 gtggtacagaaggaaatcttcatgggattctagtagggagggaagtgcttccagatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gtggtacagaaggaaatcttcatgggattctagtagggagggaagtgcttccagatggaa 756
Query: 121 ttctgtatgcatcacgagaatcacattattctgtcttcaaagcagctcgtatgtatagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ttctgtatgcatcacgagaatcacattattctgtcttcaaagcagctcgtatgtatagaa 696
Query: 181 tgggatgtgtgaagattgactgtctggtttctggtgaaatcgattgtgctgattttaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tgggatgtgtgaagattgactgtctggtttctggtgaaatcgattgtgctgattttaaag 636
Query: 241 ttaaactactcgctaacaaggacaaaccagctatcatcaacgttaatataggcacaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttaaactactcgctaacaaggacaaaccagctatcatcaacgttaatataggcacaactg 576
Query: 301 tcaaaggagcagttgatgaccttgatcttgtaatacaaacgcttgaagaaagtggattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tcaaaggagcagttgatgaccttgatcttgtaatacaaacgcttgaagaaagtggattta 516
Query: 361 cgcatgatcggttctacatccactgtgatggagcgttatttggacttatgatgcctttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cgcatgatcggttctacatccactgtgatggagcgttatttggacttatgatgcctttcg 456
Query: 421 tcaagcgtgcaccaaaggtttctttcaagaagcctatcggaagtgtgagtgtttctggtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcaagcgtgcaccaaaggtttctttcaagaagcctatcggaagtgtgagtgtttctggtc 396
Query: 481 acaagtttgttggctgtccaatgccatgcggtgttcagctaacaaggttggaacacatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 acaagtttgttggctgtccaatgccatgcggtgttcagctaacaaggttggaacacatta 336
Query: 541 atgttctctcaaggaacgtcgagtaccttgcttcaagggatgccacaatcatggggagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atgttctctcaaggaacgtcgagtaccttgcttcaagggatgccacaatcatggggagcc 276
Query: 601 gcaatggtcacgctcctatcttcctttggtacaccctcaacagaaaaggttacagaggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcaatggtcacgctcctatcttcctttggtacaccctcaacagaaaaggttacagaggat 216
Query: 661 tccagaaagaagtacagaaatgtctcagaaatgctcattac-tgaaggatcgcctac 716
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 215 tccagaaagaagtacagaaatgtctcagaaatgctcattacttgaaggatcgcctac 159
>KJC_s15393
Length = 483
Score = 107 bits (54), Expect = 4e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 1 attggtttgcccgtctgtgggagatagagaaagatcaatactggggttacataa 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 attggtttgcccgtctgtgggagatagagaaagatcaatactggggttacataa 483