Jatropha Genome Database
- JcCB0484021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0484021.10 + phase: 0
(1065 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03844 1786 0.0
>KJC_c03844
Length = 1123
Score = 1786 bits (901), Expect = 0.0
Identities = 932/937 (99%), Gaps = 4/937 (0%)
Strand = Plus / Minus
Query: 1 atggcggctgagatctctactaatggacagcaacccatttatctccatggcgacttggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 atggcggctgagatctctactaatggacagcaacccatttatctccatggcgacttggac 1058
Query: 61 ttgtacattattcaagctcgaagtttgcctaacatggatatagtctctacacggattcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 ttgtacattattcaagctcgaagtttgcctaacatggatatagtctctacacggattcgt 998
Query: 121 agttgttttactgcttgtactccccagtcaaacacctccgccgctgctaccaccactacc 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 agttgttt-actgcttgtactccccagtcaaacacctccgccgctgctaccaccactacc 939
Query: 181 gacgacgaagagactggcaatgaagacgataaaattcatcatcaccgtaatatagtcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 gacgacgaagagactggcaatgaagacgataaaattcatcatcaccgtaatatagtcact 879
Query: 241 agtgacccttatgtcactgtcgttgttcctcaagctactgttgcgcgaagtcgtgtaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 agtgacccttatgtcactgtcgttgttcctcaagctactgttgcgcgaagtcgtgtaatt 819
Query: 301 aagaacgcaaaaaaccctaagtggaaacagcggttttatattcctctagctcatcctcta 360
||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 818 aagaacgcaaaaa-cccta-gtggaaacagcggttt-atattcctctagctcatcctcta 762
Query: 361 attgaccttgaatttcatgttaaagataatgatctttttggagcagagcttataggaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 attgaccttgaatttcatgttaaagataatgatctttttggagcagagcttataggaatt 702
Query: 421 gtgaagatcccggcgagaagaatcgtcaccggggagttcattgacgagtggtttcctata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gtgaagatcccggcgagaagaatcgtcaccggggagttcattgacgagtggtttcctata 642
Query: 481 attagttcttccggtaagccgccgaagccagacactgcacttcatctagaaatgaaattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 attagttcttccggtaagccgccgaagccagacactgcacttcatctagaaatgaaattt 582
Query: 541 acgccgtgtgagaagaatccgttgtactggcatggcattgccggcgaccctgaacaccgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 acgccgtgtgagaagaatccgttgtactggcatggcattgccggcgaccctgaacaccgg 522
Query: 601 ggagtgacgaatacttactttcctttgaggaaaggaagtaaagtgacgatgtatcaagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggagtgacgaatacttactttcctttgaggaaaggaagtaaagtgacgatgtatcaagat 462
Query: 661 gcccatgtgcttgataatgagttacctgagattagaattgatgatgggaaggttttcaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gcccatgtgcttgataatgagttacctgagattagaattgatgatgggaaggttttcaag 402
Query: 721 caacagaaatgttgggaagatatttgttatgctatttcagaagctcaccatttgatttac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caacagaaatgttgggaagatatttgttatgctatttcagaagctcaccatttgatttac 342
Query: 781 attgtgggttggtctgttttttataagattaagttggttagagaacccactaggccattg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 attgtgggttggtctgttttttataagattaagttggttagagaacccactaggccattg 282
Query: 841 cctcgaggtggggatctaacacttggtgaattgcttaaatataagtccgaggaaggagtt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cctcgaggtggggatctaacacttggtgaattgcttaaatataagtccgaggaaggagtt 222
Query: 901 agggttttgttgctgatttgggatgataagacctcac 937
||||||||||||||||||||||||||||| |||||||
Sbjct: 221 agggttttgttgctgatttgggatgataaaacctcac 185