Jatropha Genome Database
- JcCB0481631.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0481631.10 - phase: 2 /pseudo/partial
(393 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00704 765 0.0
KJC_c06934 220 2e-57
KJC_c02113 50 4e-06
>KJC_c00704
Length = 1388
Score = 765 bits (386), Expect = 0.0
Identities = 393/394 (99%), Gaps = 1/394 (0%)
Strand = Plus / Minus
Query: 1 tgtgagtttgaaggatacttatgaggatgataacgcagtgcatttggttatggagttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tgtgagtttgaaggatacttatgaggatgataacgcagtgcatttggttatggagttgtg 719
Query: 61 tgagggtggagagttgtttgataggattgttgctcgaggtcattacacagaaagagctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tgagggtggagagttgtttgataggattgttgctcgaggtcattacacagaaagagctgc 659
Query: 121 tgctgctgttacaaagaccattgtagaggttgttcagatgtgccacaagcagggggtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgctgctgttacaaagaccattgtagaggttgttcagatgtgccacaagcagggggtgat 599
Query: 181 gcatcgggatctaaaacctgagaactttttgtttgcaaacaagaaggaaactgctgcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gcatcgggatctaaaacctgagaactttttgtttgcaaacaagaaggaaactgctgcttt 539
Query: 241 gaaggcaattgattttggactgtcggtgtttttcaaacctggtgaaagatttaatgagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaaggcaattgattttggactgtcggtgtttttcaaacctggtgaaagatttaatgagat 479
Query: 301 tgttggaagtccatactatatggctcctgaggtgctaaagagg-attacggcccagaagt 359
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 478 tgttggaagtccatactatatggctcctgaggtgctaaagaggaattacggcccagaagt 419
Query: 360 agatgtttggagtgctggagtcatactttacatc 393
||||||||||||||||||||||||||||||||||
Sbjct: 418 agatgtttggagtgctggagtcatactttacatc 385
>KJC_c06934
Length = 640
Score = 220 bits (111), Expect = 2e-57
Identities = 311/375 (82%), Gaps = 2/375 (0%)
Strand = Plus / Plus
Query: 7 tttgaaggatacttatgaggatgataacgcagtgcatttggttatggagttgtgtgaggg 66
||||| || |||||||||||||||| | || ||||| | || |||||||| ||||||||
Sbjct: 24 tttgacggctacttatgaggatgatgatgctgtgcacattgtgatggagttatgtgaggg 83
Query: 67 tggagagttgtttgataggattgttgctcgaggtcattacacagaaagagctgctgctgc 126
|| ||||| ||||||||||||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 84 aggggagttatttgataggattgttgcacgagggcattacacagaaagggcagctgctgc 143
Query: 127 tgttacaaagaccattgtagaggttgttcagatgtgccacaagcagggggtgatgcatcg 186
|||| ||| |||||||| ||||||||||||||||| || || || || ||||||||
Sbjct: 144 agttatgcggacaattgtagaagttgttcagatgtgccataaacatggagtcatgcatcg 203
Query: 187 ggatctaaaacctgagaactttttgtttgcaaacaagaaggaaactgctgctttgaaggc 246
||||| ||||| ||||||||| | |||||||| | ||||||||| || | || || ||
Sbjct: 204 tgatctcaaaccagagaactttctatttgcaaataggaaggaaacagcacccttaaaagc 263
Query: 247 aattgattttggactgtcggtgtttttcaaacctggtgaaagatttaatgagattgttgg 306
|||||| |||||| |||| || || || ||||||||||| ||||||||||||||||| ||
Sbjct: 264 aattga-tttggattgtccgtcttctttaaacctggtgagagatttaatgagattgtggg 322
Query: 307 aagtccatactatatggctcctgaggtgctaaagag-gattacggcccagaagtagatgt 365
||||| || || ||||| || ||||| ||||| | |||| ||||||||||| |||||
Sbjct: 323 tagtccttattacatggcgccagaggttctaaaacgcaattatggcccagaagttgatgt 382
Query: 366 ttggagtgctggagt 380
||||||||||||||
Sbjct: 383 ctggagtgctggagt 397
>KJC_c02113
Length = 1117
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 352 ccagaagtagatgtttggagtgctggagt 380
||||||| |||||||||||||||||||||
Sbjct: 748 ccagaagcagatgtttggagtgctggagt 776