Jatropha Genome Database

JcCB0480341.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0480341.10 - phase: 0 /partial
         (290 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00206                                                            575   e-164

>KJC_c00206 
          Length = 2847

 Score =  575 bits (290), Expect = e-164
 Identities = 290/290 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgccggccctggcttgttgcgtagatgctgcccttgcgcctcccggctacgctaatcat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2396 atgccggccctggcttgttgcgtagatgctgcccttgcgcctcccggctacgctaatcat 2337

                                                                        
Query: 61   gcaggggatagctcccttcagtcgtcgatcctattttccggcgtacctccggcacctacc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2336 gcaggggatagctcccttcagtcgtcgatcctattttccggcgtacctccggcacctacc 2277

                                                                        
Query: 121  accaccaccgcatccgccattgataactctcctttctctcattggtcaccttccctctct 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2276 accaccaccgcatccgccattgataactctcctttctctcattggtcaccttccctctct 2217

                                                                        
Query: 181  gccgctctctataagatcgacggatggggtgctccttacttttctgtcaactcctccggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2216 gccgctctctataagatcgacggatggggtgctccttacttttctgtcaactcctccggc 2157

                                                              
Query: 241  aatattgccgtccatccttatgggactgatacgctggctcaccaggaaat 290
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2156 aatattgccgtccatccttatgggactgatacgctggctcaccaggaaat 2107