Jatropha Genome Database

JcCB0478801.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0478801.10 - phase: 0 /partial
         (936 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03298                                                             92   3e-18

>KJC_c03298 
          Length = 890

 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                       
Query: 778 gcaattgtgcaggcagctctacctcaagggattgttccgtttgtctttgctaaagaatat 837
           ||||| |||||||||||||| || ||||| |||||||| ||||||||||| || ||||||
Sbjct: 515 gcaatagtgcaggcagctcttccacaaggaattgttccctttgtctttgcaaaggaatat 574

                                     
Query: 838 aatattcatccagacatattaagcac 863
           ||| |||||||||| ||||| |||||
Sbjct: 575 aatgttcatccagatatattgagcac 600